Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1632 ATGGCAAGGAGCTACTTCAAACAAGAACATGATCTTGAAAAAAGACGAGCTGAGGCTGCTAGGATTAGGGAGAAATACCCAGACAGGATTCCGGTAATTGTGGAGAAGGCTGAAAGAAGTGACATCCCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGACTTGACTGTAGGACAGTTTGTCTACGTGATCCGCAAAAGGATTAAATTAAGTGCAGAAAAGGCAATCTTTATATTTGTGGACAACGTCCTTCCTCCTACAGGAGCAATTATGTCTGCCATATATGATGAGAAGAAGGACGAGGATGGGTTTCTTTATGTTACATACAGTGGCGAGAACACCTTTGGGGATCTGATTTCCATTCAGTAG 372 0.4274 MARSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLISIQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1632 123 SUPERFAMILY Ubiquitin-like 4 117 IPR029071 -
Aed11g1632 123 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Aed11g1632 123 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Aed11g1632 123 CDD Ubl_ATG8 12 114 - -
Aed11g1632 123 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Aed11g1632 123 Gene3D - 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1632 Aed-Chr11 20262179 20265614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1632 K08341 - gmx:100781703 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1632 11 20262179 20265614 Aed11g1632 11 20262179 20265614 ECH
Aed11g1632 11 20262179 20265614 Aed6g0539 6 4581249 4584794 PCT