Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1566 ATGGCCGTTCAAGCTCAATATCCCTCCAATCTACTCTTCCTAAACAGCAAAACTGGGCAAGAAGCACATGATTATTCATTGCAATCTCCACCGCCAGGGCAACTCCTTGACCAATCCTATATGCTATTCAACAACGCAGGTACTAATTCTCGAAAGAGAGGAAGAGAAACAACAGCAGGTACCGGGATTGCGCCAAACGTGATGAATCCATTCTCTTTACAATCCCAATCCTGTGCTCCACAGCCACAGCTCATAGACCTCACTCAACTTCATAATCATCCAAATGCAGTAGTCTCAACTGGGTTACGCTTATCCTTCGGTGACCAACAACAACAATTACAACATCATCAACAACAACACGAACATGGGTGTCAAAGGCAATCCTCTCCTTTTGTATCTCTATTATCCGAAGGCTTGTCCCCTCAAATCAAACAACAGCGTGACGAAATTGACCAATTCCTTTATGCCCAGGGGGAGCAATTGCGGCGGGCATTAGCGGAGAAGAGACAGAGACATTATCGGGCGCTGCTAAGGGCCGCGGAGGAATCAGTGTTGAGGAGGCTGAGGGAGAAGGAAGCGGAGGTGGAGAAGGAGACGCGCCGTAACGCGGAGTTGGAGGCACGTGCGGCGAAGCTTAGTTATGAGGCGCAGCTTTGGCAGGCCAGGGCGAAGGCGCAGGAAGTCACGGCGGCGGCGTTGCAGGCGCAGCTGCAGCAGGCTATGATTATGATGAGCGCCGAGGACGGAGGAGGAGGAGGAGGGCTATCGTGCGCCGGGGGCGAAGCGGAGGATGCTGAGTCAGCGTATGTTGACCCGGAGCGAGTGGGTCCCAAATGTAGAGGCTGTGCAAAACGGGTGGCTTCGGTGGTCGTTTTGCCATGTCGCCACCTATGCATCTGCGCCGAATGCGACACTCATTTTCGGGCATGCCCTGTTTGCCTCACCGTTAAAAATTCAACCGTTCAAGTCTATCTATCTTAG 981 0.5229 MAVQAQYPSNLLFLNSKTGQEAHDYSLQSPPPGQLLDQSYMLFNNAGTNSRKRGRETTAGTGIAPNVMNPFSLQSQSCAPQPQLIDLTQLHNHPNAVVSTGLRLSFGDQQQQLQHHQQQHEHGCQRQSSPFVSLLSEGLSPQIKQQRDEIDQFLYAQGEQLRRALAEKRQRHYRALLRAAEESVLRRLREKEAEVEKETRRNAELEARAAKLSYEAQLWQARAKAQEVTAAALQAQLQQAMIMMSAEDGGGGGGLSCAGGEAEDAESAYVDPERVGPKCRGCAKRVASVVVLPCRHLCICAECDTHFRACPVCLTVKNSTVQVYLS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1566 326 MobiDBLite consensus disorder prediction 46 67 - -
Aed11g1566 326 Pfam Zinc finger, C3HC4 type (RING finger) 278 315 - -
Aed11g1566 326 PIRSF SBP1_RNase_bind 1 326 IPR017066 -
Aed11g1566 326 ProSiteProfiles Zinc finger RING-type profile. 279 313 IPR001841 -
Aed11g1566 326 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 1 325 - -
Aed11g1566 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 260 326 IPR013083 -
Aed11g1566 326 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 325 IPR017066 -
Aed11g1566 326 Coils Coil 178 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1566 Aed-Chr11 19842508 19844639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1566 K19042 - gmx:100779548 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1566 11 19842508 19844639 Aed6g0622 6 5309865 5312875 PCT