Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0899 ATGACGAGAGGGGAGAGAGCAGAGACAGAGATAGAGAGTGGCGTTTCGTTGCCGTCGGTGGGAACAGACGCGAAGAAGCGTCGAGTGACATATTTCTACGAGCCTTCCATCGGCGAGTACTACTATGGCCGAGGCCACCCCATGAAGCCGCTTCGCATTCGCATGGCCCACGACCTCATCGTCCACTACGGCCTCCACCGCCGCATGCAAATCAATCGCCCCTTCCCCGCCGACGAATCCGACATCGGCCGCTTCCACTCCGACGACTACGTCGAATTCCTCTCCGCCGTCTCCCCTCAAATGCTCTCCGAGAATTCCCACTACAACTACCGCCAGCTCGAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACGACTTCTGCCGCGCCTCCGCCGGCGGCTCCATCGGCGCCGCCGTCCGCCTCAACCGGGGCGACTCCGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAGAAGGACCAGGCCTCTGGCTTTTGCTACGTCAACGACATTGTTCTTGGCATTCTTGAACTTCTCAAAGTTCATAGGCGTGTTCTGTATATTGATATCGATGTTCACCATGGGGATGGCGTTGAGGAGGCATTTTACATTACTGATAGGGTGATGACAGTGTCATTCCATAAGTTTGGGGATTTTTTCCCAGGAACTGGGCACATTAAAGACATTGGGGTGGGTTCCGGAAAGAATTATTCTCTAAATGTCCCACTCAATGATGGATTGGATGATGAGACTTTCCGTGATCTGTTTCACCCCATCATTGAAAAAGTAATGGGTGTTTACCAACCGCATGCTGTTGTTCTTCAATGTGGAGCTGACTCATTGTCTGGTGACCGGTTGGGTTGCTTCAACTTGACTGTGAAGGGTCATGCAGATTGCCTTCGTTTCCTTAGATCATTCAATGTTCCTCTAATGGTGTTGGGTGGGGGAGGATATACACTTTCGAACGTTGCTCGCTGTTGGTGTTATGAGACTGCTGTGGCAGTGGGAGTGGAGCCTAGTCCTAAGTTGCCTTACAACGATTATTATGAATATTTTGGCCCGGACTATAATCTTCATGTTGATCCATCCAACATGGAAAACCTAAACACATCCAGTGATCTGGAAAAAATTCGGAATACATTACTGGAACAACTTTCCAGGCTTCCCCATGCACCTAGTGCACCTTTTCAAACAACACCTTCAGTCATAGAAGTTCCAGAAGAGGAAGAGGAGGACATGGATGTAAGACCAAAACGTCGTATGTTGAGTGGTGAAGATTTTGATTCTGATTCCGATGATGACATGACTAACTCAAAGAACTCTGATTTAACTGCCCAAACGAAGTAA 1368 0.5058 MTRGERAETEIESGVSLPSVGTDAKKRRVTYFYEPSIGEYYYGRGHPMKPLRIRMAHDLIVHYGLHRRMQINRPFPADESDIGRFHSDDYVEFLSAVSPQMLSENSHYNYRQLERFNVGEDCPVFDGLYDFCRASAGGSIGAAVRLNRGDSDIAINWAGGLHHAKKDQASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYITDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKNYSLNVPLNDGLDDETFRDLFHPIIEKVMGVYQPHAVVLQCGADSLSGDRLGCFNLTVKGHADCLRFLRSFNVPLMVLGGGGYTLSNVARCWCYETAVAVGVEPSPKLPYNDYYEYFGPDYNLHVDPSNMENLNTSSDLEKIRNTLLEQLSRLPHAPSAPFQTTPSVIEVPEEEEEDMDVRPKRRMLSGEDFDSDSDDDMTNSKNSDLTAQTK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0899 455 MobiDBLite consensus disorder prediction 419 433 - -
Aed10g0899 455 SUPERFAMILY Arginase/deacetylase 27 394 IPR023696 -
Aed10g0899 455 PANTHER HISTONE DEACETYLASE 13 446 - -
Aed10g0899 455 PRINTS Histone deacetylase superfamily signature 191 206 IPR000286 -
Aed10g0899 455 PRINTS Histone deacetylase superfamily signature 159 182 IPR000286 -
Aed10g0899 455 PRINTS Histone deacetylase superfamily signature 276 286 IPR000286 -
Aed10g0899 455 PIRSF HDAC_I_euk 10 455 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 PANTHER HISTONE DEACETYLASE 6 13 446 - -
Aed10g0899 455 Gene3D Histone deacetylase domain 18 407 IPR037138 -
Aed10g0899 455 PRINTS Histone deacetylase signature 48 65 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 PRINTS Histone deacetylase signature 81 99 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 PRINTS Histone deacetylase signature 116 133 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 PRINTS Histone deacetylase signature 137 157 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 PRINTS Histone deacetylase signature 237 250 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 PRINTS Histone deacetylase signature 254 272 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 PRINTS Histone deacetylase signature 178 194 IPR003084 GO:0004407|GO:0016575
Aed10g0899 455 Pfam Histone deacetylase domain 46 339 IPR023801 -
Aed10g0899 455 CDD HDAC_classI 32 341 - -
Aed10g0899 455 MobiDBLite consensus disorder prediction 395 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0899 Aed-Chr10 7570494 7573747 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0899 K06067 - gmx:100801159 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1420 6 18626096 18630952 Aed10g0899 10 7570494 7573747 PCT