Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed10g0795 | ATGGCAAGTCAAAGCGGTGCCCCTCGAAAGAGTATTACGTCGACGAGGAGAGCCTCTGAATCAGGAGTGCCTCGAAAATCAATCTCGTCTTTGCGGCCTTTGGCATTGGCAGGAGAGCGGACAGTGAAATCACTGCGACTTACAAAGGCCCTGACGGTACCTGAAACAACATCTGTCTATGAAGCTTGCCGTCGGATGGCTGCCCGTAGAGTGGATGCTCTATTACTAACTGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAACAACAAGAGTTATTGCCAAAGAGATTAATCTTGAAGAGACTCCTGTTTCTAAAGTCATGACTAGGAATCCGGTATTTGTCCTTTCTGAAACTTTAGCTGCAGAAGCCCTCCAAAAGATGGTGCAAGGGAAATTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTTTTGGCTTTACTAGACATAGCAAAGTGTTTGCATGATGCCATTGCTCGAATGGAAAGGGCAGCTGAGAAGGGAAAAGCAATTGCAGCAGCTGTTGAAGGAGTTGAAAAACACTGGGGAACATCAGACTCCAATACATCATTCATTGAGACTCTTCGGGATCAGATATTCAAGCCATCATTGTCTACTATCATTCCTGAGAATTCAAAGCTTGTAACAGTATTACCAACAGACTCAGTTCTGACTACAACAAAGAAGATGGTTGAATTACGTGAAAGTTGTGCTGTTGTGACAGTTAATGGCAAACCTCATGGCATCTTTACTTCAAAGGATATCTTGTTGCGGGTAATTGCACAAAATCTTTCTCCAGAATCAACTCCCGTTGAGAAGGTCATGACTCCAAATCCAGAGTGTGTAGTAATTGATACACCCATTGTTGATGCACTTCACACTATGCATGATGGAAAGTTTTTGCATCTTCCTGTGGTTGATAGAGATGGCAGTGTAGTTGCTGTGGTTGATGTGATTCATGTCACTCATGCTGCTGTGGCGACAGTAAGTCAGGTTGGGAATAATGAAGCGGCCACCACCTTGATGCAAAGATTTTGGGATTCAGCCATGGCCTTAACTCCAAATGATGATGACGATGATACTCGAAGTGAGAATTCCTTTAAAGTGGCTTCTGAGGGAGGAGAAACGGGGAGATCCATTCCTCATCTATCGTCAAGCATAGCCAATACATTTTCCTTCAAAATAGAAGATAAGAAGGGGAGAATGCACAGATTCACGTGTGATACCCGGAGCATGACGGAGGTTATAACTTCAATCCTTCAGAGACTTGGTGATGATATTGATCCTAACAACATACCCCAAATTCTGTATGAAGATGAAGATCATGATAAAGTTGTATTGGCCTCAGACAGTGATCTTGCAGCAGCTGTGGATCATGCAAGGACTGCTGGTTTGAAGGGGTTGAAATTGCATTTAGACCACGGAGGACCACGTGGTAATGTGAAAGGTTCTCATTCAGGAAGTTTTGCTTATTCAAATGCATGGGCCTCAGCATATAGTACTGCTGCTGCTGGAGCTGCACTTGTTGCTGGTTTAGGCATATTAACGTACTTGAAGCGAGTTTGA | 1578 | 0.4366 | MASQSGAPRKSITSTRRASESGVPRKSISSLRPLALAGERTVKSLRLTKALTVPETTSVYEACRRMAARRVDALLLTDSNALLCGILTDKDITTRVIAKEINLEETPVSKVMTRNPVFVLSETLAAEALQKMVQGKFRHLPVVENGEVLALLDIAKCLHDAIARMERAAEKGKAIAAAVEGVEKHWGTSDSNTSFIETLRDQIFKPSLSTIIPENSKLVTVLPTDSVLTTTKKMVELRESCAVVTVNGKPHGIFTSKDILLRVIAQNLSPESTPVEKVMTPNPECVVIDTPIVDALHTMHDGKFLHLPVVDRDGSVVAVVDVIHVTHAAVATVSQVGNNEAATTLMQRFWDSAMALTPNDDDDDTRSENSFKVASEGGETGRSIPHLSSSIANTFSFKIEDKKGRMHRFTCDTRSMTEVITSILQRLGDDIDPNNIPQILYEDEDHDKVVLASDSDLAAAVDHARTAGLKGLKLHLDHGGPRGNVKGSHSGSFAYSNAWASAYSTAAAGAALVAGLGILTYLKRV | 525 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed10g0795 | 525 | CDD | CBS_pair_MUG70_1 | 47 | 163 | - | - | |
| Aed10g0795 | 525 | Pfam | CBS domain | 108 | 152 | IPR000644 | - | |
| Aed10g0795 | 525 | Pfam | CBS domain | 47 | 93 | IPR000644 | - | |
| Aed10g0795 | 525 | Pfam | CBS domain | 215 | 261 | IPR000644 | - | |
| Aed10g0795 | 525 | Pfam | CBS domain | 275 | 325 | IPR000644 | - | |
| Aed10g0795 | 525 | Gene3D | - | 393 | 476 | - | - | |
| Aed10g0795 | 525 | SUPERFAMILY | CBS-domain pair | 217 | 329 | IPR046342 | - | |
| Aed10g0795 | 525 | MobiDBLite | consensus disorder prediction | 371 | 385 | - | - | |
| Aed10g0795 | 525 | ProSiteProfiles | PB1 domain profile. | 392 | 479 | IPR000270 | GO:0005515 | |
| Aed10g0795 | 525 | CDD | PB1_MUG70 | 395 | 479 | - | - | |
| Aed10g0795 | 525 | ProSiteProfiles | CBS domain profile. | 112 | 170 | IPR000644 | - | |
| Aed10g0795 | 525 | Gene3D | - | 30 | 177 | IPR046342 | - | |
| Aed10g0795 | 525 | Gene3D | - | 189 | 341 | IPR046342 | - | |
| Aed10g0795 | 525 | ProSiteProfiles | CBS domain profile. | 46 | 105 | IPR000644 | - | |
| Aed10g0795 | 525 | ProSiteProfiles | CBS domain profile. | 279 | 340 | IPR000644 | - | |
| Aed10g0795 | 525 | SUPERFAMILY | CBS-domain pair | 39 | 156 | IPR046342 | - | |
| Aed10g0795 | 525 | SMART | PB1_new | 394 | 479 | IPR000270 | GO:0005515 | |
| Aed10g0795 | 525 | ProSiteProfiles | CBS domain profile. | 211 | 271 | IPR000644 | - | |
| Aed10g0795 | 525 | MobiDBLite | consensus disorder prediction | 356 | 385 | - | - | |
| Aed10g0795 | 525 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Aed10g0795 | 525 | PANTHER | CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN | 12 | 513 | - | - | |
| Aed10g0795 | 525 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 12 | 513 | - | - | |
| Aed10g0795 | 525 | Pfam | PB1 domain | 394 | 478 | IPR000270 | GO:0005515 | |
| Aed10g0795 | 525 | SMART | cbs_1 | 282 | 330 | IPR000644 | - | |
| Aed10g0795 | 525 | SMART | cbs_1 | 217 | 264 | IPR000644 | - | |
| Aed10g0795 | 525 | SMART | cbs_1 | 115 | 159 | IPR000644 | - | |
| Aed10g0795 | 525 | SMART | cbs_1 | 49 | 97 | IPR000644 | - | |
| Aed10g0795 | 525 | SUPERFAMILY | CAD & PB1 domains | 388 | 478 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed10g0795 | Aed-Chr10 | 6594638 | 6600680 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed10g0795 | - | - | gmx:100785816 | 859.366 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aed10g0795 | 10 | 6594638 | 6600680 | Aed5g2249 | 5 | 24417797 | 24422823 | PCT |