Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0754 ATGGAGGGTGTGAGCTTAGCTGAGCCCCTGAGATCAGAAATCGATTCCAAACCCAAACACGACACAGCAAAAGACGAAGAAGATGACGACGACGCTGCTTTGAAAGACAGCACTGACGCCGAAGTCACCAAAATTCGTCTAATGAGAGCCTTTGTTGAAACACGAGATCCCTCTTCTAAGGAAGTAGATGATTTGATGATTAGAAGATTCTTGCGGGCTCGTAGTTTAGATGTGGAGAAGGCTTCGGCAATGTTCCTCAAGTACTTGAAATGGAAACGTTCATTTGTTCCAAATGGTTGCATTTCACCGTCAGAGATTGCCGAAGACATTGCACAGGACAAGGTTTTTACGCAAGGGCTTGACAAGAAGGGTCGTCCTATAGTTGTTGCCTTTGCTGCTAAACATTTTCAAAGCAAAAACGGTGCCGATGGATTCAAACACGTTAAAGGATGGGCATACGCAAACAGTGATCTTCGTGGATATCTTAATGCTCTATCCATTTTGCAGGATTGCTACCCTGAAAGATTGGGGAAGATGTTTATTGTACACGCACCTTACATGTTTATGAAAATATGGAAAATGGTTTACCCTTTCATTGATGACAATACCAAGACAAAGATAGTGTTTGTGGAGACCAAAAAGCTGAAATCAACATTGCTAGAAGAGATAGAGGAGAGTCAACTACCAGATATATACGGAGGCCAAATGCCATTAGTTCCTATTCAAGATAGCTGA 735 0.4231 MEGVSLAEPLRSEIDSKPKHDTAKDEEDDDDAALKDSTDAEVTKIRLMRAFVETRDPSSKEVDDLMIRRFLRARSLDVEKASAMFLKYLKWKRSFVPNGCISPSEIAEDIAQDKVFTQGLDKKGRPIVVAFAAKHFQSKNGADGFKHVKGWAYANSDLRGYLNALSILQDCYPERLGKMFIVHAPYMFMKIWKMVYPFIDDNTKTKIVFVETKKLKSTLLEEIEESQLPDIYGGQMPLVPIQDS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0754 244 SMART CRAL_TRIO_N_2 63 88 IPR011074 -
Aed10g0754 244 SUPERFAMILY CRAL/TRIO N-terminal domain 34 99 IPR036273 -
Aed10g0754 244 MobiDBLite consensus disorder prediction 1 37 - -
Aed10g0754 244 Pfam CRAL/TRIO domain 151 234 IPR001251 -
Aed10g0754 244 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 39 240 IPR001251 -
Aed10g0754 244 MobiDBLite consensus disorder prediction 12 26 - -
Aed10g0754 244 SUPERFAMILY CRAL/TRIO domain 108 238 IPR036865 -
Aed10g0754 244 Gene3D - 148 242 IPR036865 -
Aed10g0754 244 PANTHER OS03G0850700 PROTEIN 148 244 - -
Aed10g0754 244 SMART sec14_4 109 237 IPR001251 -
Aed10g0754 244 CDD SEC14 115 235 IPR001251 -
Aed10g0754 244 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 19 147 - -
Aed10g0754 244 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 148 244 - -
Aed10g0754 244 Gene3D - 31 147 IPR036865 -
Aed10g0754 244 PANTHER OS03G0850700 PROTEIN 19 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0754 Aed-Chr10 6183305 6185596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0754 - - gmx:100797666 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0754 10 6183305 6185596 Aed5g2204 5 24105988 24110216 ECH
Aed10g0754 10 6183305 6185596 Aed10g0754 10 6183305 6185596 ECH
Aed5g2204 5 24105988 24110216 Aed10g0754 10 6183305 6185596 PCT