Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0747 ATGAGTGGGAGCGGCGGCGTCGTTTCGATGGATCACGTGCTGGTGGCGCTGGGGGAGACGAAGGAGGAGAGGGAGGTTCGTATTCGGAGCCTGTTCAATTTCTTCGACGCCGCGAACAACGGTTACTTGGACTTCGCTCAGATAGAGGCGGGGCTCTCGGCGCTTCAGATTCCGCCGGAGTACAAGTACGCCAGGGAACTCTGCCAGGTTTGCGACGCTAACAGCGACGGCAGAGTCGAGTACCACGAGTTTCGCCGCTACATGGACGCCAAGGAATTGGAGCTTTACCGCATCTTCCAATCCATTGATGTTGAACATGACGGTACCATTCTCCCTGAAGAGCTCTACGAAGCGCTTCTCAAAGCTGTAGGGAACAGGTTTGTGGATTCTTTTATTGGGGAGAGGTTTGCTTTGTTGTTTGGCCGGACATTTGGTGAACTCTTCTTGACACGTCTCTCTTTTGCTGATGTACATGCACTATGCATCTTCAATGCTGCAGGGATTGAAATGGATGACGAGGAGCTTGCTCACTTTGTGGAGCATGTTGATAAGGATAACAATGGAATTATCACTTTTGAAGAATGGAGAGATTTTCTTCTACTTTACCCTCACGAAGCAACTATTGAAAATATATATCATCATTGGGAGAGGGTGTGCCTTGTTGACATTGGAGAGCAAGCTGTCATTCCTGAAGGCATCAGCAAGCACATGAACCGGAGCAAATATTTTCTTGCTGGTGGAATAGCAGGAGCTATTTCTCGTACGGCAACTGCTCCACTTGATCGTCTGAAGGTGGTCTTACAAGTTCAAACTGAGCGTGCTTCTATCATGCCAGCAGTAACGAAGATATGGAAGCAAGACGGTCTGTTAGGATTTTTCCGAGGTAATGGATTGAATGTTGTGAAGGTAGCACCAGAAAGTGCCATCAAATTTTATGCTTTTGAAATGCTGAAAAAGGTAATTGGAGAGGCCCAAGGCAACAAGAAGTCAGATATTGGTACTGTTGGGAGGCTTGTTGCAGGTGGTACAGCTGGTGCAATTGCCCAGGCTGCTATCTATCCAATGGATCTCATTAAAACTAGGTTACAGACTTGTCCGTCTGAAGGTGGAAGGGTTCCTAAGCTGGGAACTCTTACAATGAATATATGGGTTCAAGAGGGACCTCGAGCTTTCTACAGAGGGCTTGTTCCATCTCTGCTTGGCATGATTCCTTATGCAGCCATTGATCTCACTGCTTATGATACCTTGAAAGATATTTCCAAGAGATATATTCTTCAGGATAGTGAACCTGGTCCTCTAGTACAACTAGGATGTGGGACAATTTCTGGGGCTGTTGGAGCTACTTGTGTCTATCCATTGCAGGTCATTCGAACAAGACTGCAGGCACAACGTTCCAACACATCCGATGCTTACAAAGGGATGTTTGATGGCTTTCGGAGGACTTTTCAGCTTGAAGGCTTTATAGGTTTCTACAAGGGACTCTTTCCAAATCTCCTCAAAGTTGTGCCAGCTGCAAGCATTACTTATGTGGTCTACGAAAGTTTGAAGAAGAGTCTGGATCTGGATTAG 1569 0.4665 MSGSGGVVSMDHVLVALGETKEEREVRIRSLFNFFDAANNGYLDFAQIEAGLSALQIPPEYKYARELCQVCDANSDGRVEYHEFRRYMDAKELELYRIFQSIDVEHDGTILPEELYEALLKAVGNRFVDSFIGERFALLFGRTFGELFLTRLSFADVHALCIFNAAGIEMDDEELAHFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHMNRSKYFLAGGIAGAISRTATAPLDRLKVVLQVQTERASIMPAVTKIWKQDGLLGFFRGNGLNVVKVAPESAIKFYAFEMLKKVIGEAQGNKKSDIGTVGRLVAGGTAGAIAQAAIYPMDLIKTRLQTCPSEGGRVPKLGTLTMNIWVQEGPRAFYRGLVPSLLGMIPYAAIDLTAYDTLKDISKRYILQDSEPGPLVQLGCGTISGAVGATCVYPLQVIRTRLQAQRSNTSDAYKGMFDGFRRTFQLEGFIGFYKGLFPNLLKVVPAASITYVVYESLKKSLDLD 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0747 522 SUPERFAMILY Mitochondrial carrier 235 514 IPR023395 -
Aed10g0747 522 Gene3D Mitochondrial carrier domain 233 520 IPR023395 -
Aed10g0747 522 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 167 520 - -
Aed10g0747 522 SUPERFAMILY EF-hand 16 237 IPR011992 -
Aed10g0747 522 Gene3D - 161 225 - -
Aed10g0747 522 Gene3D - 8 160 - -
Aed10g0747 522 ProSiteProfiles EF-hand calcium-binding domain profile. 90 125 IPR002048 GO:0005509
Aed10g0747 522 ProSitePatterns EF-hand calcium-binding domain. 183 195 IPR018247 -
Aed10g0747 522 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 42 123 - -
Aed10g0747 522 Pfam EF-hand domain pair 94 197 IPR002048 GO:0005509
Aed10g0747 522 ProSiteProfiles Solute carrier (Solcar) repeat profile. 332 419 IPR018108 -
Aed10g0747 522 ProSiteProfiles Solute carrier (Solcar) repeat profile. 430 518 IPR018108 -
Aed10g0747 522 Pfam Mitochondrial carrier protein 240 322 IPR018108 -
Aed10g0747 522 Pfam Mitochondrial carrier protein 331 419 IPR018108 -
Aed10g0747 522 Pfam Mitochondrial carrier protein 431 519 IPR018108 -
Aed10g0747 522 SMART efh_1 27 55 IPR002048 GO:0005509
Aed10g0747 522 SMART efh_1 63 91 IPR002048 GO:0005509
Aed10g0747 522 SMART efh_1 174 202 IPR002048 GO:0005509
Aed10g0747 522 SMART efh_1 94 122 IPR002048 GO:0005509
Aed10g0747 522 ProSiteProfiles EF-hand calcium-binding domain profile. 170 205 IPR002048 GO:0005509
Aed10g0747 522 PANTHER SOLUTE CARRIER FAMILY 25 167 520 - -
Aed10g0747 522 PRINTS Mitochondrial carrier protein signature 242 255 IPR002067 GO:0055085
Aed10g0747 522 PRINTS Mitochondrial carrier protein signature 255 269 IPR002067 GO:0055085
Aed10g0747 522 PRINTS Mitochondrial carrier protein signature 347 365 IPR002067 GO:0055085
Aed10g0747 522 PRINTS Mitochondrial carrier protein signature 295 315 IPR002067 GO:0055085
Aed10g0747 522 PRINTS Mitochondrial carrier protein signature 392 410 IPR002067 GO:0055085
Aed10g0747 522 PRINTS Mitochondrial carrier protein signature 439 461 IPR002067 GO:0055085
Aed10g0747 522 PANTHER SOLUTE CARRIER FAMILY 25 42 123 - -
Aed10g0747 522 ProSiteProfiles EF-hand calcium-binding domain profile. 23 58 IPR002048 GO:0005509
Aed10g0747 522 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 320 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0747 Aed-Chr10 6150882 6156077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0747 6 522 EF-hand Containing Proteins AT5G51050 68.147 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0747 K14684 - gmx:100795008 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0747 10 6150882 6156077 Aed5g2199 5 24084803 24088770 ECH
Aed10g0747 10 6150882 6156077 Aed10g0747 10 6150882 6156077 ECH