Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0722 ATGGCAGCAGAGCTAGTCAGTGGTGCAACAAGCGAGAAACTGGCTGAAACTGATTGGACAAAAAATATTGAAATTTGTGAGCTAGTTGCTCATGATAAAAGGCAAGCAAGAGATGTTGTTAAAGCTATAAAAAAGAGACTAGGAAGCAAACACCCCAATACTCAACTCTATGCTGTCATGTTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGAGCAGGTGATCGATACTGGAATTATTCCTATTCTAGTAAAACTTGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCTTGGTGGTGCATCTGGAAAGTTTCCGCAGTATTATAATGCATATTATGATTTGGTGAGTGCCGGAGTGCAGTTTGCTCAAAGGGATCAAGTGGTCCAATCAAATAATCCTAGTTCACAACCTAGTAGGACTAGTAATGTACCAAACAGGGAGCAGGCCTCACCTAGACATGAAGCGGTTGCTCAGCCAGCAGAGTCCCAGACTGTACCTGAATCTAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTACTAAAAGAGGTCCTTGATGCGGTTGATGCTCAAAATCCTCAGGAAGCAAGGGATGAATTCACCCTTGACCTTGTAGAACAATGCTCTTTTCAAAAACAAAGGGTTATGCATCTTGTGATGGCTTCTCGAGATGAAAGGATAGTTTCTCAAGCAATTGAATTGAATGAGAAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGTTACAACAACTGCCGCTCAATTTGACCATGAAGAAGCGGAGGAGGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGCAAGGGAAAGGCTTGTGCAAGGCCTGAAGACGAGGAGACTGAAACCGACATCCATCGCTTGGGTTTGCTTGGAGAGAGACTCAATCGTCCGCTAATACGACCACTCTCGATAGAGCCGGCATCTCGAGAAGCCGGTGCTCGATCTCCACCTGTTGTGATGCCACCATCTCGAGAGGCCGATACTCGATCTCCACCTGCTTTGATCCCACCTCCACGGCCAAAACAAAATGGGGAGGCTCCTCATCCGGTGGCAATTCCACCACCACCTGCAAAGCACATGGAGAGAGAGAGGTTTTTTCAGGAAAACAAGGATGGTTCTAATTTGTCTGGCCACATGAGAGGCCTCTCCTTACATAGTCGTAATGGCAGCAGCTCTCACAGTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1296 0.4514 MAAELVSGATSEKLAETDWTKNIEICELVAHDKRQARDVVKAIKKRLGSKHPNTQLYAVMLLEMLMNNIGEHIHEQVIDTGIIPILVKLVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFAQRDQVVQSNNPSSQPSRTSNVPNREQASPRHEAVAQPAESQTVPESSIIQKASNALEVLKEVLDAVDAQNPQEARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSQAIELNEKLQKVLARHDDLLAGRVTTTAAQFDHEEAEEEEEPEQLVRRLRKGKACARPEDEETETDIHRLGLLGERLNRPLIRPLSIEPASREAGARSPPVVMPPSREADTRSPPALIPPPRPKQNGEAPHPVAIPPPPAKHMERERFFQENKDGSNLSGHMRGLSLHSRNGSSSHSHSGSFDFSD 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0722 431 MobiDBLite consensus disorder prediction 142 164 - -
Aed10g0722 431 MobiDBLite consensus disorder prediction 142 184 - -
Aed10g0722 431 MobiDBLite consensus disorder prediction 398 431 - -
Aed10g0722 431 Pfam VHS domain 5 111 IPR002014 GO:0035091|GO:0043130
Aed10g0722 431 SUPERFAMILY GAT-like domain 144 268 - -
Aed10g0722 431 MobiDBLite consensus disorder prediction 275 311 - -
Aed10g0722 431 Coils Coil 187 207 - -
Aed10g0722 431 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Aed10g0722 431 MobiDBLite consensus disorder prediction 287 311 - -
Aed10g0722 431 Gene3D - 176 275 IPR038425 -
Aed10g0722 431 PANTHER TOM1-LIKE PROTEIN 1 431 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aed10g0722 431 CDD VHS 2 130 - -
Aed10g0722 431 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Aed10g0722 431 SUPERFAMILY ENTH/VHS domain 4 137 IPR008942 -
Aed10g0722 431 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 431 - -
Aed10g0722 431 MobiDBLite consensus disorder prediction 359 384 - -
Aed10g0722 431 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Aed10g0722 431 Gene3D - 2 136 IPR008942 -
Aed10g0722 431 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Aed10g0722 431 MobiDBLite consensus disorder prediction 333 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0722 Aed-Chr10 5912382 5918307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0722 - - gmx:100785131 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0722 10 5912382 5918307 Aed10g0722 10 5912382 5918307 ECH
Aed5g2181 5 23940189 23947145 Aed10g0722 10 5912382 5918307 PCT