Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0216 ATGGCAGGGAAAACCAAGAACAAGGTGGAGGTTCAATTGGGTTGCGGTTTGGTTGGGAGAATTTTCTATCTCAAAACCAATAATAGGCCAAGAAAATCCTCTGTTCATTCACTACCCGTGAAGGCTTGCACCACTGCACAACAACAGAGGGATCAGGCCAAAACCGAAACCAAACCCTCTCCAAACCATGAAACAAAAGATAGCTCCTTTGGAACCATTCCAGCGAGAAAGAGTGGCTCTAGTCACCGTGCACCTTCTGCACACCAAAACACTCAAAATCAACGAAGCCATGACTCCAATGAACACACGGTTAACTCTATGGAACTTGCTAGGATAAGTACTAATACTTGTTATCATCAAAACTACGAGACCAAATCACCGGCCAAGGAATTTGTGTTACCAATCACTGGGAATTTGCTAATGAATAACAGCCCAAGAACTAGCATAACCAAGAGCAAAGAGTTGAGCTCTTTGTCCGGTTCCTGTTCTTACAACAGTAATACTAACAAAACCATGATGGGGAACATCATGAGGAAGAGCAGCGACGAGGTTGCGCAGTTTCGGAGTCCGAGGAACAATGGCAGAGTGGACCCTGAGGTGTTGAAGTCCATGGGGAACGAAGCGTACAAGCAGGGAAGGTTTGAAGAGGCTTTGGCTTTGTATGACCGAGCCATTGCTGTTGACTCCAACAAGGCAACGTATCATTGCAATAAGAGCGCGGCTTTGATAGCCTTGGGAAGGTTTCTGCAGGCAATTCTTGAGTCTCAGGAAGCTATCAGGTTGGAGCCTTCGTATGGCAGACCCCACACCCGTTTGGCAACTATTTATTTCAGACTGGGAGAAGCAGAAAAGGCACTGACTTGCAATGAAACAACCCCATGTCTTGCTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAGCAAATGCGCCGAAGCTCGGAAAGTCAAGGACTGGAAAGCTATATTAAAGGAAACACAGGCTGCAATATCCTTGGGTGCTGATTCAGCTCCGATGGTGTATTCTTTACAAACTGAAGCTTTGCTGAAGCTCCTAAGACATCAAGAGGCACACGCTACCTACGAGAAAATGCCAAAATTTGACCTTGATTCTTCTAACAAATTATTTGGCCCGGTTCGTAGTGCTTACCTATTGATGATACGCGCACAAATTTACTTGGCAGCGGGCAGGTTTGAGGATGCTGTGACAGCATCTCAGCAAGCAGCTAAACTAGATCCAAGTAGCTTTGAGGTGAATGCAGTGGTGAGAAGGGCCAGAGCAGTGACATCAGCCAGAATGAGTGGTAACTTACTCTTCAAGGCATCAAAATTCACGGAAGCATATGCTGTATACAATGAAGGATTAGAGCATGATCCACACAACTCAGTTCTGCTATGCAATAGGGCAGCGTGTCGTTCTAAACTCGGTCAATTCGAGAAAGCAATTGAAGATTGTAATGTAGCACTTATAGTTCAGCCTAGTTATAGCAAGGCAAGGTTGAGGAGGGCAGATTGCAATGCCAAGTTGGAACGATGGGAAGCTGCAATTCAAGACTATGAAATGCTACTAAGAGAAAAGCCAGGGGATGAAGAGGTGGCCAGGGCTCTGTTTGAGACTCAGCTCCAACTCAAGATGCTGCGTGGTGAAGATATTAAGGACTTGAAATTTGGTTCAAATTTGTTTTTCATCTCAAGCAATGATCGGTTTAGACATTATGTAACGTCACCTGGAATGTCTGTGGTACTCTTTTGCAACAAGGCAACCCACAAGCAAGTGTTGTTGGTGTTGGAACAAACCTGCAAGAGATTCCCATCGGTTAATTTCCTTAAGGTGGAAATTGAAGACCACCCCTACTTGGCGAAATCAGAAGGTGTGAACTGCATTCCAGCCTTTAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTCCAGGCAACAACCACGATTTGTTGGAAAAATTAGTTAAATTATATAGCAGCTGA 1980 0.4455 MAGKTKNKVEVQLGCGLVGRIFYLKTNNRPRKSSVHSLPVKACTTAQQQRDQAKTETKPSPNHETKDSSFGTIPARKSGSSHRAPSAHQNTQNQRSHDSNEHTVNSMELARISTNTCYHQNYETKSPAKEFVLPITGNLLMNNSPRTSITKSKELSSLSGSCSYNSNTNKTMMGNIMRKSSDEVAQFRSPRNNGRVDPEVLKSMGNEAYKQGRFEEALALYDRAIAVDSNKATYHCNKSAALIALGRFLQAILESQEAIRLEPSYGRPHTRLATIYFRLGEAEKALTCNETTPCLAFQAQALQNHLSKCAEARKVKDWKAILKETQAAISLGADSAPMVYSLQTEALLKLLRHQEAHATYEKMPKFDLDSSNKLFGPVRSAYLLMIRAQIYLAAGRFEDAVTASQQAAKLDPSSFEVNAVVRRARAVTSARMSGNLLFKASKFTEAYAVYNEGLEHDPHNSVLLCNRAACRSKLGQFEKAIEDCNVALIVQPSYSKARLRRADCNAKLERWEAAIQDYEMLLREKPGDEEVARALFETQLQLKMLRGEDIKDLKFGSNLFFISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVNCIPAFKIYKNGSRVKEIPGNNHDLLEKLVKLYSS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0216 659 CDD TRX_family 568 655 - -
Aed10g0216 659 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 658 - -
Aed10g0216 659 SUPERFAMILY TPR-like 198 416 IPR011990 GO:0005515
Aed10g0216 659 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 658 IPR044534 -
Aed10g0216 659 SUPERFAMILY TPR-like 432 543 IPR011990 GO:0005515
Aed10g0216 659 MobiDBLite consensus disorder prediction 30 102 - -
Aed10g0216 659 ProSiteProfiles TPR repeat profile. 427 460 IPR019734 GO:0005515
Aed10g0216 659 Gene3D Tetratricopeptide repeat domain 196 546 IPR011990 GO:0005515
Aed10g0216 659 MobiDBLite consensus disorder prediction 82 102 - -
Aed10g0216 659 Pfam Tetratricopeptide repeat 388 460 - -
Aed10g0216 659 Pfam Tetratricopeptide repeat 473 528 - -
Aed10g0216 659 Coils Coil 501 521 - -
Aed10g0216 659 MobiDBLite consensus disorder prediction 30 55 - -
Aed10g0216 659 ProSiteProfiles TPR repeat profile. 381 414 IPR019734 GO:0005515
Aed10g0216 659 Gene3D Glutaredoxin 556 658 - -
Aed10g0216 659 Pfam TPR repeat 205 243 - -
Aed10g0216 659 ProSiteProfiles TPR repeat profile. 198 231 IPR019734 GO:0005515
Aed10g0216 659 SMART tpr_5 495 528 IPR019734 GO:0005515
Aed10g0216 659 SMART tpr_5 427 460 IPR019734 GO:0005515
Aed10g0216 659 SMART tpr_5 232 265 IPR019734 GO:0005515
Aed10g0216 659 SMART tpr_5 198 231 IPR019734 GO:0005515
Aed10g0216 659 SMART tpr_5 461 494 IPR019734 GO:0005515
Aed10g0216 659 SMART tpr_5 381 414 IPR019734 GO:0005515
Aed10g0216 659 SUPERFAMILY Thioredoxin-like 547 655 IPR036249 -
Aed10g0216 659 Pfam Thioredoxin 591 653 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0216 Aed-Chr10 1729564 1733038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0216 K09527 - gmx:100814381 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0216 10 1729564 1733038 Aed10g0216 10 1729564 1733038 ECH
Aed3g1644 3 21051214 21055502 Aed10g0216 10 1729564 1733038 PCT