Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01870 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATTCCCTTGAAGCTCGTGGACACTCTACCAGATATGTATCATCTGAATTGGCCACTGATGTTACCATTAATGTCGGTGAAGTTAAGTTTTACCTTCATAAGTTTCCTCTATTGTCGAAGAGCAAGCGATTACAGAAGTTGATGTCGAAAGCTAGTGAAGAGGATTCTGATGATATTTACTTAGATGATTTCCCAGGAGGACCTAAGGCCTTTGAAATATGTGCAAAATTCTGTTATGAAATGACGGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGCTGTGCGGCCGAATATCTTGAGATGACTGAGGATATTGATCTGGGGAACTTAGTTTTTAAAATTGAAGTGTTCCTTAACTCAGGAATCTTCTGTTGCTGGAAGGATTCTATAATAGTCCTCCAAACTTGTAATTCTTTTCTGCCATGGTCTGAGGATCTGGAGATCATTGAGAGATGCATAGGTTCCATAACTTCTAAAATTGCTGTTGATCCGGCGAGCGTGTTCTGGTCTTACACTTATAATAGGAAATTAACAGAGAGAAAAAAACTTGTTGAGCACAAGATGATGTTTCTAGATCACATTGAATCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAACTGGACATTGATCTTTACAAAAGAGTAATGATTTGTGTGAAATCAAATGGAAGAACCGATAGCATTGTGATTGCAGAGGCACTAAAAGTGTATGCAATGAGATGGTTACCTGATTCCATTGATGCATTGACTTGGGAAGAGCATGCATCAAGAAACAAGTCTCTGGTAGAAACAGTTATCTGTTTATTGCCATGTGATAATGGCATTGGTTGCTCTTGTAGTTTTTTACTGAAGCTTCTGAAATTTGCCATATTAGTTGGAGCAAATGAGTCAGCAAGAGAAGAACTGATGAAGAAAATTAGCTCGAAATTGCATGAAGCTTGTGTCAAGGATTTGCTGATTCCAGCAAAGTCTCCTCAGATAACAACTTATGATGTTGATTTGGTACAAGGCCTTTTGAATCAATACTTGATTCACGAACAGGGAAGATGCAATATGGAGGTTATTGAGGAGAAAGATAATGGAAAAGATCTTTATATTTCGAGTGATAAATCCATATTGAACATTGGAAAGTTGGTCGACGGTTACCTCGGAGAAATTGCCCATGAGCCTAATCTCGGTCTCTCTAGTTTCGTCAATCTGTCGCAATCAGTTCCTGATTGTGCTAGGTCAAGTCACGATGGTCTATACAGAGCTATTGACATTTATTTGAAGAAGCATCCGGATTTGACAAAAGCAGAAAGGAAGAAGCTATGTAGACTCATGGATGTGAAGAAACTGACGGCGAATGCTTCAATGCATGCTGCGCAGAATGACCGGCTTCCTCTTCGAGTGATAGTGCAGGTTCTGTTTTTTGAGCAGGTTAGAGCCACAGCCAGAATTCAAGCAATACATGATCCTTTGCGGGTTGGAGGAGGTGAGAAGAGAGGGATTAATAGATGCCAGTCCCTCAAGGTGCCGATGATGAAAGAGGAAGGCAAGCTGAGTAAGAAGAACAGCAAAAACAGCCGAAGCGGCATGCAGTTGCTGCGGTCTGGGTCAAGGAGAATCATTGATAAGTTATGGATTGTGGGAAAAGGACAGCAAGAGAATAATAGGAGCTCTGAGACTTCAGGGAGTTTAGAGAATAATAGCCCAACTATGTCATCTGCTTTGAGACACCAGAGGCATTCTATCTCTTAG 1779 0.4058 MKFMKLGSKPDSLEARGHSTRYVSSELATDVTINVGEVKFYLHKFPLLSKSKRLQKLMSKASEEDSDDIYLDDFPGGPKAFEICAKFCYEMTVTLNAYNVVAARCAAEYLEMTEDIDLGNLVFKIEVFLNSGIFCCWKDSIIVLQTCNSFLPWSEDLEIIERCIGSITSKIAVDPASVFWSYTYNRKLTERKKLVEHKMMFLDHIESVPKDWWVEDICELDIDLYKRVMICVKSNGRTDSIVIAEALKVYAMRWLPDSIDALTWEEHASRNKSLVETVICLLPCDNGIGCSCSFLLKLLKFAILVGANESAREELMKKISSKLHEACVKDLLIPAKSPQITTYDVDLVQGLLNQYLIHEQGRCNMEVIEEKDNGKDLYISSDKSILNIGKLVDGYLGEIAHEPNLGLSSFVNLSQSVPDCARSSHDGLYRAIDIYLKKHPDLTKAERKKLCRLMDVKKLTANASMHAAQNDRLPLRVIVQVLFFEQVRATARIQAIHDPLRVGGGEKRGINRCQSLKVPMMKEEGKLSKKNSKNSRSGMQLLRSGSRRIIDKLWIVGKGQQENNRSSETSGSLENNSPTMSSALRHQRHSIS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01870 592 MobiDBLite consensus disorder prediction 523 542 - -
Adu10g01870 592 CDD BTB_POZ_NPY3-like 21 124 - -
Adu10g01870 592 Pfam BTB/POZ domain 25 116 IPR000210 GO:0005515
Adu10g01870 592 SMART BTB_4 29 127 IPR000210 GO:0005515
Adu10g01870 592 SUPERFAMILY POZ domain 18 115 IPR011333 -
Adu10g01870 592 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Adu10g01870 592 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 5 585 IPR029961 GO:0060918|GO:0099402
Adu10g01870 592 Gene3D Potassium Channel Kv1.1; Chain A 8 124 IPR011333 -
Adu10g01870 592 MobiDBLite consensus disorder prediction 560 592 - -
Adu10g01870 592 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Adu10g01870 592 PANTHER OS12G0117600 PROTEIN 5 585 IPR043454 -
Adu10g01870 592 Pfam NPH3 family 211 464 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01870 Adu-Chr10 85682402 85685731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01870 22 487 EF-hand Containing Proteins AT3G44820 32.929 8.26e-86 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01870 - - aip:107620912 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02901 06 106703659 106709590 Adu10g01870 10 85682402 85685731 PCT