Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02901 ATGAAGTTTATGAAGTTGGGATCAAAGCCTGATGCCCTTAAAGCTGATGGAAAATCTGTCAGGTATGTGTCATCTGAATTGGCTACAGATATCACAATCACTGTCGGTGAAGTTAAGTTTTGCCTTCACAAGTTCCCTCTACTCTCCAAGAGCAATCGATTACAGAGGTTAGTATCGAAGGTTGATGAAGAGAATTCTGATGAAATATACTTGGATGACTTCCCTGGAGGACCGAAGGCCTTCGAAGTTTGCGCAAAATTCTGCTATGGAATGACAGTTACTCTAAATCCTTATAATGTAGTGGCTGCTCGTTGTGCTGCGGAATTCCTTGAGATGACTGAAGATATCGATAAAGGAAACTTGATTTTCAAGATTGAGGTGTTTTTGAACTCTAGTATCTTTCGTAGCTGGAAAGATTCGATAATTGTTCTCCAAACAACAAAGGCTCTTCTTCCATGGTCTGAGGATCTGAAGATCATTGGGAGATGCATTGATTCCATTGCTTCAAAGACTTCAGTGGACCCAGGCAACATCACTTGGTCTTACACTTATAACCGGAAATTAACAGAACCGGATAATATTGTGGAGGAGACATCCCAAGAGAAAGTTAAGCATGTTCCAAGGGATTGGTGGGTTGAAGATATATGTGAATTGGACATTGATCTTTATAGAAGAGTGATGATTACAGTGAAATCAAAGGGAAGAATGGATGGTGTTGTGATTGGGGAGGCACTAAAAATCTATGCTATAAGATGGTTACCCGATTCTGTAGATGAATTGGTGTCTGGTGCCCACGCCCAGAGGTACAAAACTTTGGTAGAAACCATTGTGTGTCTGCTGCCGAGTGATAATGGCGTTGGTTGTTCATGTAGCTTCTTGCTCAAGTTATTGAAAGTGGCAATACTAGTTGAAGCTGATGAGTCATCGAGAGAAGAGTTGACGAAGAGCATCAGCCTGAAATTACATGAAGCTTCTGTGAAAGACTTGTTGATTCCAGCAAGGTCTCCTCAAAGTACTATGTTTGATGTTGATTTGGTACAAGGTCTTTTGAATCGATACATGAGTGAAGAAAAGGACGGCCTTAATTTCGAAGCCAATGAGAAGAAAGATAAAGTAAATGATGAATCCCTTTTGAGGAGTATGTCCTTGTTGAATGTTGGCAAGTTGGTTGATGGTTATATCAGAGAAATTTCGCACGATCCGAATCTCAGCCTTGCTAGTTTTATTGCTTTGTCTCAGTCAATTCCGAAGTCTGCTAGGCCAAATCATGATGGTTTGTACAGAGCTATTGATATCTACTTGAAGGAGCACCCTGGTCTGACAAAAGCTGAAAAAAGGAACATATGTGGACTCATGGATGTCAAAAAATTAACCATTGATGCGTCGACACACGCCGCTCAAAATGATCGTCTTCCTCTCCGGGTTATAGTGCAGGTTCTCTATTTTGAGCAGGTCAAAGCTTCTGCCATCCCTCAATCCATTAATAACATTCCACACGGCCCTTCAAATGCCGACTCAAACGGAGACGATGAATGCAAACAAACTGAGGGTGAGAGCTGTCAATACCTTGACAACCAAGTATGTCACTTGAAAGAAGGAGAGTTGTGCAAGAATGGAAAGTTGAACAAGAAGAATAGCAAGAACAGCCGGAGCGGCACGCAGTTGTTGCCTTCTCGGTCGAGGAGGATCTTTGATAAGTTGTGGAATGTGGGAAAAGGACAGGCAGAGAATAGGAGTTCAGAGACTTCAGGGAGTTCTAATAGCCCAGCTTCAATAGTTCCTGGGGACACCAAATCTTCTGGTTCATCTTTAAGACACCGGAGGCATTCTATATCTTAG 1839 0.4198 MKFMKLGSKPDALKADGKSVRYVSSELATDITITVGEVKFCLHKFPLLSKSNRLQRLVSKVDEENSDEIYLDDFPGGPKAFEVCAKFCYGMTVTLNPYNVVAARCAAEFLEMTEDIDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKALLPWSEDLKIIGRCIDSIASKTSVDPGNITWSYTYNRKLTEPDNIVEETSQEKVKHVPRDWWVEDICELDIDLYRRVMITVKSKGRMDGVVIGEALKIYAIRWLPDSVDELVSGAHAQRYKTLVETIVCLLPSDNGVGCSCSFLLKLLKVAILVEADESSREELTKSISLKLHEASVKDLLIPARSPQSTMFDVDLVQGLLNRYMSEEKDGLNFEANEKKDKVNDESLLRSMSLLNVGKLVDGYIREISHDPNLSLASFIALSQSIPKSARPNHDGLYRAIDIYLKEHPGLTKAEKRNICGLMDVKKLTIDASTHAAQNDRLPLRVIVQVLYFEQVKASAIPQSINNIPHGPSNADSNGDDECKQTEGESCQYLDNQVCHLKEGELCKNGKLNKKNSKNSRSGTQLLPSRSRRIFDKLWNVGKGQAENRSSETSGSSNSPASIVPGDTKSSGSSLRHRRHSIS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02901 612 SMART BTB_4 29 127 IPR000210 GO:0005515
Adu06g02901 612 MobiDBLite consensus disorder prediction 539 558 - -
Adu06g02901 612 MobiDBLite consensus disorder prediction 573 600 - -
Adu06g02901 612 PANTHER OS12G0117600 PROTEIN 4 600 IPR043454 -
Adu06g02901 612 ProSiteProfiles NPH3 domain profile. 209 486 IPR027356 -
Adu06g02901 612 Pfam NPH3 family 209 462 IPR027356 -
Adu06g02901 612 CDD BTB_POZ_NPY3-like 20 124 - -
Adu06g02901 612 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 600 IPR029961 GO:0060918|GO:0099402
Adu06g02901 612 Pfam BTB/POZ domain 25 117 IPR000210 GO:0005515
Adu06g02901 612 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Adu06g02901 612 SUPERFAMILY POZ domain 21 115 IPR011333 -
Adu06g02901 612 MobiDBLite consensus disorder prediction 569 612 - -
Adu06g02901 612 MobiDBLite consensus disorder prediction 493 515 - -
Adu06g02901 612 Gene3D Potassium Channel Kv1.1; Chain A 13 119 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02901 Adu-Chr6 106703659 106709590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02901 22 527 EF-hand Containing Proteins AT3G44820 32.963 1.53e-93 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02901 - - gmx:100809437 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02901 06 106703659 106709590 Adu06g02901 06 106703659 106709590 ECH
Adu06g02901 06 106703659 106709590 Adu10g01870 10 85682402 85685731 PCT