Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00929 ATGGCGAATACTCTAAACAGCGCTACCATCTCCAGAACCCAATTCGGAGATCAATGCCCCTCTTTCCATTCCGTGATTCCTCCACCTACTCGTAGATCTCTTCCTTTCATAACGGTGCATAAGGGAAAACGTGTTGAGCTGAATAGAAGAAGAGCTCTTGTGGCGGTTGTGAAAGCGAAGAGTAGTAGCTTTGAAGATTCAGAATCTTTTGGTGTTGATATTTCTTTGAGTCCGAGAGTTAATGCTGTTAAGCCTTCTAAGACTGTTGCCATAAGTGACCAGGCCACTGCTCTTGTCGAAGCCGGAGTGCCGGTTATTCGCTTGGCCGCCGGGGAACCTGATTTCGATACACCTGCCGTCATAGCTGAGGCTGGGATTAATGCTATTCGCGAAGGATACACACGGTACACCCCTAATGCCGGAACATTTGAATTGCGCAGCGCGATTTGTCATAAGTTGAAGGAGGAGAATGGAATTACATATACTCCTGATCAGATTGTGGTAAGCAATGGAGCAAAGCAGAGTATTGCTCAGGCAGTACTTGGAGTTTGTTCACCCGGCGATGAGGTCATTATTCCGGCCCCATTTTGGGTGAGTTACCCAGAAATGGCAAGATTGGCTGATGCAACACCTGTGATTCTTCCAACCAGCATATCTGATAATTTTCTTTTGGATCCCAAACTCCTTGAATCCAAAATCACTGAAAAATCAAGAGTACTTATTCTTTGCTCGCCATCTAACCCAACAGGGTCAGTCTATCCAACGAAATTACTTGAAAAGATAGCCCAAATTGTAGCAAAGCACCCCAGGCTTCTGGTCATCTCTGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCATACGAGCTTTGCATCTTTACCTGGCATGTGGGACAGGACTCTTACTGTGAACGGTTTTTCCAAGGCATTTGCAATGACTGGTTGGCGACTTGGATATATTGCTGGCCCGAAACATTTTATTGCAGCATGCGGAAAGCTTCAAAGTCAGTTCACTTCAGGGGCAAGTAGTATATCCCAGAAAGCTGCAGTTGCTGCCTTAGGGCTAGGCTATGCTGGTGGGGAGGCTGTTTCTACCATGGTGAAAGCATTCAGGGAACGAAGAGATTTCTTGGTTAGAAGTTTTAGAGAGATGGATGGTGTGAAAATATCAGAACCTCAGGGAGCATTTTATCTATTCCTTGATTTCAGCTCCTACTATGGAAGAGAAGTTGATGGTTTCGGTAAAATTGAGAATTCTGAGTCCCTCTGTCGATACCTTCTAGACAAGGGCCAGGTTGCTCTGGTGCCGGGAAGTGCATTCGGAGATGACACTTGCATCCGCATCTCTTATGCTGCATCCCTTACTACCTTACAGGCAGCTGTAGAGAGAATTAAGAAAGCACTTACCCCTCTAATCTCTGCTGCTCTTGTTTGA 1440 0.4535 MANTLNSATISRTQFGDQCPSFHSVIPPPTRRSLPFITVHKGKRVELNRRRALVAVVKAKSSSFEDSESFGVDISLSPRVNAVKPSKTVAISDQATALVEAGVPVIRLAAGEPDFDTPAVIAEAGINAIREGYTRYTPNAGTFELRSAICHKLKEENGITYTPDQIVVSNGAKQSIAQAVLGVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTSISDNFLLDPKLLESKITEKSRVLILCSPSNPTGSVYPTKLLEKIAQIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFIAACGKLQSQFTSGASSISQKAAVAALGLGYAGGEAVSTMVKAFRERRDFLVRSFREMDGVKISEPQGAFYLFLDFSSYYGREVDGFGKIENSESLCRYLLDKGQVALVPGSAFGDDTCIRISYAASLTTLQAAVERIKKALTPLISAALV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00929 479 CDD AAT_like 106 468 - -
Adu10g00929 479 Gene3D - 135 357 IPR015421 GO:0003824
Adu10g00929 479 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 307 320 IPR004838 GO:0003824|GO:0009058|GO:0030170
Adu10g00929 479 SUPERFAMILY PLP-dependent transferases 76 470 IPR015424 -
Adu10g00929 479 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 28 473 - -
Adu10g00929 479 Pfam Aminotransferase class I and II 104 466 IPR004839 GO:0009058|GO:0030170
Adu10g00929 479 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 28 473 - -
Adu10g00929 479 Gene3D Aspartate Aminotransferase, domain 1 89 464 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00929 Adu-Chr10 15189814 15193548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00929 K15849 - gmx:100776446 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00929 10 15189814 15193548 Adu10g00929 10 15189814 15193548 ECH
Adu03g03188 03 117499650 117502701 Adu10g00929 10 15189814 15193548 PCT