Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03188 ATGGAGAAGAAGCAGAGTAGTGCAGCGGCCATGGGGGTTGATGACTCCTTGAACCCACGAGTCGACGCCGTGAAGCCTTCAAGGACTGTGGCCATAAGCGACCAAGCAAACGCACTGGTTCAAGCTGGCGTCCCCGCTGGGATTAATGCAATTCGTGAAGGCCATACAAGGTACACCCCGAATGCCGGAACATTACAATTACGCCAGGCTATTTCTCATAAGCTCAAAGAGGAGAACGGGATCACTTACGCCCCTGATCATATTGTGCTTAGTAATGGAGCCAAGCAGAGTCTTGCCCAGGCCGTTCTTGCAGTTTGCTCCCCGGGAGACGAGGTCATTATTCCTGCTCCATATTGGGTGAGTTACCCAGAAATGGCAAGATTGGCTGATGCTGTACCTGTTATTCTTCCAACATCAATAGATAATCATTTCCTTTTGGACCCCAAACTCCTTCAATCCAAAATTACTCAAAGATCAAGGCTTCTCATTCTTTGCTCGCCATCTAACCCAACAGGATCTGTCTACCCCAAGAAATTACTTCAAGACATAGCCCACATTGTAGCAAACCACCCCAGGCTTCTGATTCTCTCTGATGAGATTTACGAGCATATAATTTATGCACCAGCAACTCATACAAGCTTTGCATCACTACCAGGAATGTGGGACAGAACCTTAACTGTGAACGGATTTTCCAAGGCCTTTGCAATGACTGGATGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATTCAAAGTCAGTTCACTACAGGGCCCAATAGCATAGCTCAGAAAGCTGGAGTTGCAGCGTTAGGACTAGGCTATGCTGGTGGGGAAATTGTAGCTAATATGGTGAAAGCATTTCGGGAGCGCCGAGATTTCTTGGTTAAAAGTTTTAGGGAAATGGAGGGTCTTAAAATATCAGAACCCCAGGGGGCATTTTATCTATTCATTGATTTCAGCTACTACTATGGAAGAGAAGCTGAAGGATTTGGTAGAATTGATGATTCGGAGTCCCTTTGTCGATATCTTTTGGATAAGGGCCAGGTGGCCTTGGTGCCTGGGAGTGCATTTGGAGATGATACTTGTGTTCGGATATCATATGCAGAATCCCTTACTATCCTTCAAGAAGCTGTGGAGAGAATTAAGAAAGCACTCGCCCCTCTCAGCTCTGCTGCACTCCGTTAA 1206 0.4635 MEKKQSSAAAMGVDDSLNPRVDAVKPSRTVAISDQANALVQAGVPAGINAIREGHTRYTPNAGTLQLRQAISHKLKEENGITYAPDHIVLSNGAKQSLAQAVLAVCSPGDEVIIPAPYWVSYPEMARLADAVPVILPTSIDNHFLLDPKLLQSKITQRSRLLILCSPSNPTGSVYPKKLLQDIAHIVANHPRLLILSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQFTTGPNSIAQKAGVAALGLGYAGGEIVANMVKAFRERRDFLVKSFREMEGLKISEPQGAFYLFIDFSYYYGREAEGFGRIDDSESLCRYLLDKGQVALVPGSAFGDDTCVRISYAESLTILQEAVERIKKALAPLSSAALR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03188 401 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 229 242 IPR004838 GO:0003824|GO:0009058|GO:0030170
Adu03g03188 401 Gene3D - 57 279 IPR015421 GO:0003824
Adu03g03188 401 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g03188 401 Gene3D Aspartate Aminotransferase, domain 1 45 386 IPR015422 GO:0003824
Adu03g03188 401 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 46 397 - -
Adu03g03188 401 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 8 45 - -
Adu03g03188 401 CDD AAT_like 49 390 - -
Adu03g03188 401 SUPERFAMILY PLP-dependent transferases 17 392 IPR015424 -
Adu03g03188 401 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 46 397 - -
Adu03g03188 401 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 8 45 - -
Adu03g03188 401 Pfam Aminotransferase class I and II 44 388 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03188 Adu-Chr3 117499650 117502701 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03188 K15849 - gmx:100776446 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03188 03 117499650 117502701 Adu03g03188 03 117499650 117502701 ECH
Adu03g03188 03 117499650 117502701 Adu10g00929 10 15189814 15193548 PCT