Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00749 ATGAGGTACCCCTCTTCCCCCCTCCCCCTCCCCTCCCCTCTCTCTTCACAAGCTCTTCGAcggcgGGCTGCAGCAATTCCAGGAACAGAAGGTGGAACTGTTCTTCAAATGAAATTGGTTTATAATCACTTGGCTCCTTTGGTTCTCTTGTTTCTACAGTGGATGGATTGTTCCTGTGCTAGCTTTCTACACAGATATTTCAATCTCTTCCACATAGTTATATACAAGATACACAATGATGGTAGAAACATGTCTAGTCATGGAAGGAAAGCTACCATAGGGGACTTTTATGCTGTTATATTGCCATCTCTCCAGCGGCTTCACGGTAGCTTGGAGAAGTTGGAAACTTCAAAAGAAGGCCAATCATTGAGCATGGAACATTCAAGTTATGGCAAGAAGATGATTGTTGAAGGTGATGGGAAACTAACCAATGTTGACTTGCAAAGAGAGGATGAATGTGATATTTGCTTAGAGCCTTGCACCAAAATGGTCCTGCCTAATTGTTGCCATGCCATGTGTATCCGGTGCTACCGCAAGTGGAACACCCGGTCGCAGTCTTGCCCTTTCTGCCGCGGTAGCTTGAGGAGGGTTAACTCTGAGGATCTTTGGGTGCTAACTTGCAATGAAGATGTTGTTGATGCTGAAACAGTTTCTAAGGAAGACTTGTGGCGTTTCTACCTTTATATCAATAAGCTACCAAAACATCACCCAGAAGCACTTTTTGTAATGTACTATGAATATCTCATTTGA 750 0.4333 MRYPSSPLPLPSPLSSQALRRRAAAIPGTEGGTVLQMKLVYNHLAPLVLLFLQWMDCSCASFLHRYFNLFHIVIYKIHNDGRNMSSHGRKATIGDFYAVILPSLQRLHGSLEKLETSKEGQSLSMEHSSYGKKMIVEGDGKLTNVDLQREDECDICLEPCTKMVLPNCCHAMCIRCYRKWNTRSQSCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLWRFYLYINKLPKHHPEALFVMYYEYLI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00749 249 SMART ring_2 153 190 IPR001841 -
Adu10g00749 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 202 IPR013083 -
Adu10g00749 249 Pfam Ring finger domain 151 191 IPR001841 -
Adu10g00749 249 SUPERFAMILY RING/U-box 144 195 - -
Adu10g00749 249 ProSitePatterns Zinc finger RING-type signature. 168 177 IPR017907 -
Adu10g00749 249 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 21 249 - -
Adu10g00749 249 PANTHER RING FINGER PROTEIN 41, 151 21 249 - -
Adu10g00749 249 ProSiteProfiles Zinc finger RING-type profile. 153 191 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00749 Adu-Chr10 9646979 9651711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00749 - - aprc:113850330 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00749 10 9646979 9651711 Adu10g00749 10 9646979 9651711 ECH
Adu10g00749 10 9646979 9651711 Adu03g04495 03 134293054 134295360 PCT