Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04495 ATGGAAGTGGTGCCGTACCAGCTTTCTCGGTTGCCTTACCAGGATTCCCTCAAACTGCTTGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCAAGAGCAAAAGGTGGGACTCTTCTCCAAATGAAATTGGTTTACAATCACTTGGCTCCTCTCCTTCTGTTGTTCTTGCAATGGATGGATTGTTCTTGCACATGCTTTCTACACAGTTATCTCAACTTGTTCCACATACTTGTGTACAAAGTTCATAATGATGGTAGATCAAGCATAACTTCTCATGCAAGGAAGGCAACCATAAGAGACTTTTATGCCGTTATTCTGCCGTCTCTCCAGCGGCTCCATGGAAGCTTGGATAAGTTGGAGATTTGTAAGGAAGGACACTCTTGCAACAATGGCAACAAGATTATTGAAGGTGATAGGAAACTGATCAATGTTGATTTGGAAAGAGAAGATGAATGTGGAATTTGCTTAGAGCCATGCACCAAAATGGTTTTGCCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACACGCGGTCCGAGTCATGCCCGTTTTGCCGCGGCAGCTTAAGGAGAGTTAACTCTGAGGATCTATGGGTTCTGACCTGCAATGAGGATGTTGTTGATGCTGAAACTGTTTCAAAAGAGGACTTGCTGCGCTTCCATCTTTATATCAATAGCCTACCTAAAGATTACCCTGATGCACTATTTTTAATGTATTATGAATACTTAATTTGA 759 0.4282 MEVVPYQLSRLPYQDSLKLLEADIQHANALAAAIPRAKGGTLLQMKLVYNHLAPLLLLFLQWMDCSCTCFLHSYLNLFHILVYKVHNDGRSSITSHARKATIRDFYAVILPSLQRLHGSLDKLEICKEGHSCNNGNKIIEGDRKLINVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNTRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFHLYINSLPKDYPDALFLMYYEYLI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04495 252 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Adu03g04495 252 ProSiteProfiles Zinc finger RING-type profile. 156 194 IPR001841 -
Adu03g04495 252 PANTHER RING FINGER PROTEIN 41, 151 6 252 - -
Adu03g04495 252 Pfam Ring finger domain 154 194 IPR001841 -
Adu03g04495 252 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 252 - -
Adu03g04495 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 205 IPR013083 -
Adu03g04495 252 SUPERFAMILY RING/U-box 146 198 - -
Adu03g04495 252 SMART ring_2 156 193 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04495 Adu-Chr3 134293054 134295360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04495 - - gmx:100790422 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00749 10 9646979 9651711 Adu03g04495 03 134293054 134295360 PCT