Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00718 ATGGCAGTAGATCAGACACGAAGCTTGGGCCTCCGCTGCGGATCCAATGCTCCGTTTCGCTTATCCGGTGTGAGAGCGCAGGTTGCTACGCTTGAGGAGGCAGGAACAGTTGCGTCTCAGAAAGTGGAAGCACCGGTTGTGGTGGTCACCGGAGCCTCCAGAGGTATCGGCCGTTCAATCGCGCTGACATTGGGACAAGCAGGTTGCAAGGTGCTTGTTAACTACGCAAGGTCATCTAAGGAAGCTGAGGAGGTTTCCAAGGAGATCGAGGCATCTGGTGGACAAGCTCTTACATTTGGGGGAGATGTTTCCAATGAAGCTCACGTGGAATCCATGATTAAAGCTGCGACCGATGCTTGGGGAACTGTTGATGTACTGATAAACAATGCAGGAATTACTAGAGATGGTTTGTTAATGAGAATGAAGAAATCTCAATGGCAGGAGGTTATTGATCTAAATCTCACAGGGGTTTTTCTTTGCACACAGGCTGCAGCTAAGATTATGATGAAGAAGAAGAAGGGAAGGATAATCAATATTGCATCAGTTGTTGGTCTGGTTGGCAATGTTGGACAAGCCAATTATAGTGCTGCAAAAGCCGGAGTAATTGGCTTAACAAAAACTGTTGCAAAGGAGTATTCTAGCAGAAGCATCACTGTATTTCTTAAATCTATGCATTTCTTCCTGATATCAAAGAGCAAATAG 702 0.4601 MAVDQTRSLGLRCGSNAPFRLSGVRAQVATLEEAGTVASQKVEAPVVVVTGASRGIGRSIALTLGQAGCKVLVNYARSSKEAEEVSKEIEASGGQALTFGGDVSNEAHVESMIKAATDAWGTVDVLINNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNVGQANYSAAKAGVIGLTKTVAKEYSSRSITVFLKSMHFFLISKSK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00718 233 PRINTS Glucose/ribitol dehydrogenase family signature 194 213 IPR002347 -
Adu10g00718 233 PRINTS Glucose/ribitol dehydrogenase family signature 121 132 IPR002347 -
Adu10g00718 233 PRINTS Glucose/ribitol dehydrogenase family signature 168 184 IPR002347 -
Adu10g00718 233 PRINTS Glucose/ribitol dehydrogenase family signature 46 63 IPR002347 -
Adu10g00718 233 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 45 225 - -
Adu10g00718 233 PANTHER SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER 20 221 - -
Adu10g00718 233 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 132 IPR002347 -
Adu10g00718 233 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 IPR002347 -
Adu10g00718 233 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 IPR002347 -
Adu10g00718 233 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 181 209 IPR020904 GO:0016491
Adu10g00718 233 Gene3D - 42 226 - -
Adu10g00718 233 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 221 IPR036291 -
Adu10g00718 233 Pfam short chain dehydrogenase 46 219 IPR002347 -
Adu10g00718 233 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 4-LIKE 20 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00718 Adu-Chr10 8763907 8767700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00718 11 219 Acyl Lipid Metabolism Gene Families AT1G24360 69.378 1.52e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00718 K00059 - gmx:100809809 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00718 10 8763907 8767700 Adu03g04513 03 134500272 134504023 PCT