Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00675 ATGAGAACCAGAAGAGGAGGCCTCTCTTATCCTCCACTTCTACCCTTATCCACCATGTGTTCCAACAAAGCTCTTTCAGAAAGGTCCTCTTTCAACACACTCACACCACTCCCCAATAGAAACAGAAACAACAAAATGCCTTCTTCGCAACAACAATTCGTTAGCCGTAAAAGGCACAAGACATTATCATTATTATCATCTTCCTCTTCCGACACAACAACAACAACAGTCGGAGGCTCCGAACTCTTGGAGACCTTGCCGGATGACATTCTCCTCTCAATCCTCGCGAAACTTAGTTCGTCCTCCAATTCTCCTTCCGATTTCATCCGTGTTCTTTTGACGTGTAAAAGGCTGAACAGGTTGGGTCTTCACTCAGTGGTTCTATCAAAAGCATCCCAAAAAACATTCTCAGTCAAAGCCAGAAACTGGTCAGAATCTTCTCACCGCTTCCTCAAACGTTGCGCTGATGCCGGAAACATCGAAGCATGCTACACTCTTGGAATGATTCGGTTCTACTGTTTAGGAAACCGTGAGAGTGGAAGGTCGCTTATATCGAAGGCGGCGATGAGGTGTCACGCGCCGGCACTTTACTCTCTGGCCGTTATACAGTTCAATGGGAGCGGAGCCTCGAAGGACGACAAGGACCTAAGGGGCGGTGTGGCTCTTTGCGCACGCGCCGCATTCCTCGGCCACGTCGACGCGCTGCGCGAGTTGGGTCATTGCTTGCAAGACGGTTACGGAGTTAAGCGAAACGTTATGGAAGGGCGACGGTTTCTCGTTCAAGCCAACGCGCGTGAGCTGGTGTCCGTTTGCAACAGCCTCCACGCGCGCACTACTATCACGTGGGGCGTTATGCCGAACCAGAACCCGAACCTAAATCCAAGGGTCCAGTATGCTGCAGGGTGTCCGTTGCTAAGTGATTACGGCTGTAACGTCCCCGCTCAGGAGCCACACCTTGCGAACCGGTTCATGATTGAGTGGTTTTCGAACCGGGGTGGTTCGGCCGGGCCGAGTCGGAGGCTGTGTTCACATTTGGGTTGTGGAAGGCCTGAAACGAGGAAGAGAGAGTTTCGGAGATGTTCGGTTTGTGGAGTGGTTAATTATTGCTCACGCGCTTGCCAAGCACTTGACTGGAAGAGTCGGCATAAAGTGGAGTGTGCTCCTGTTGAGAGGTGGATCGACGATGACGACGGTGAAGATGGCGGTGAAGTGGCAGTGGTGGATAGTTAG 1230 0.5163 MRTRRGGLSYPPLLPLSTMCSNKALSERSSFNTLTPLPNRNRNNKMPSSQQQFVSRKRHKTLSLLSSSSSDTTTTTVGGSELLETLPDDILLSILAKLSSSSNSPSDFIRVLLTCKRLNRLGLHSVVLSKASQKTFSVKARNWSESSHRFLKRCADAGNIEACYTLGMIRFYCLGNRESGRSLISKAAMRCHAPALYSLAVIQFNGSGASKDDKDLRGGVALCARAAFLGHVDALRELGHCLQDGYGVKRNVMEGRRFLVQANARELVSVCNSLHARTTITWGVMPNQNPNLNPRVQYAAGCPLLSDYGCNVPAQEPHLANRFMIEWFSNRGGSAGPSRRLCSHLGCGRPETRKREFRRCSVCGVVNYCSRACQALDWKSRHKVECAPVERWIDDDDGEDGGEVAVVDS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00675 409 SUPERFAMILY HIT/MYND zinc finger-like 341 391 - -
Adu10g00675 409 MobiDBLite consensus disorder prediction 31 54 - -
Adu10g00675 409 Pfam MYND finger 347 386 IPR002893 -
Adu10g00675 409 PANTHER MYND DOMAIN-CONTAINING 78 403 IPR044508 -
Adu10g00675 409 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 78 403 - -
Adu10g00675 409 ProSiteProfiles Zinc finger MYND-type profile. 344 386 IPR002893 -
Adu10g00675 409 SUPERFAMILY HCP-like 147 263 - -
Adu10g00675 409 Gene3D - 331 390 - -
Adu10g00675 409 SUPERFAMILY F-box domain 78 139 IPR036047 GO:0005515
Adu10g00675 409 Gene3D Tetratricopeptide repeat domain 124 276 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00675 Adu-Chr10 8026409 8028223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00675 - - adu:107468872 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00675 10 8026409 8028223 Adu03g04536 03 134731435 134733241 PCT