Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04536 ATGAGAACAAGAAGAGGATTGTGTTATTCTGCACCTGGAGTAGTAACAAGGATGTGTTCCGTAGGGGTTGGGAAGAGAAAGAACAACAAGTTGCAGCATAATGTTTACGGAGACTCTAATATTTATAGCCTCAGGAAAAGGCACAAGAGGTTACCGGAAAAGGCCGCCGGCGAATGCGATTTTTTCGAGTCTTTGCCGGACGACCTTGTAATCTCTATCTTCTGCAAGCTTAGCTCCTCCGCTACTTCCCCTTCCGATTTTGTCAATGTTTTAATCACATGCAGGAGATTAAACAGTTTAGGTCTCCATTCTCTTGTGTTATCGAAAGCATCTCCGAGGACTTTCTCTATTAGAGCAAAGAACTGGTGCGATTCGGCGCACCGGTTCCTCAAACAGTGTGCAGATGCAGGAAATGTTGAAGCATGCTATACTCTAGGCATGATTCGGTTCTACTGTTTGCAGAACAGAGGGAGCGGGGCTTCACTCATGGCCAAGGCAGCCATGAACTCTCACGCACGAGCTCTCTATTCGCTCGCCGTTATACAGTTCAACGGTAGCGGAGGCACCAAGAACGACAAGGACCTCCGTGCCGGAGTTGCCTTGTGCGCACGCGCCGCCTTCCTCGGCCACGTCGACGCGCTGCGGGAGCTAGGCCACTGCCTTCAGGATGGATACGGCGTTCGCCAGAACATCGCGGAGGGGAGGCGCTTCCTTGTTCAGGCCAACGCCAGGGAACTCGCCGCCGTGATCTCCGCCGGAGCTGCTGCGCGCCAGTGGCTGACATGGAACATCCACCCGCTCCGCCAGTTCGCCGGGTCAGCGGCAGGTTGCCCGCTGCTGAGCGATTTCGGGTGCAATGTTCCGATGCCGGAGGCACATCCGGCGAGCAGGTTCCTGTCGGAATGGTTCGCGGCTCGGGACGCGTCTCCCGGTCCGGGACTGAGGTTGTGCTCTCATGCCGGTTGCGGTCGGCCAGAGACGAGGAAGCACGAGTTTCGAAGGTGCTCGGTGTGTGGCGCGGTGAACTATTGTTCACGCGCCTGCCAGGCGCTTGATTGGAAGTTTCGGCACAAGGTGGAGTGCACCCCCGTGGAGCGGTGGCTCGAGGACGACGGAGATGACGTCGTTGATGACGGCGTAGACGCTGACGCCGTGATGGCGGTGGATAGTTAG 1173 0.5635 MRTRRGLCYSAPGVVTRMCSVGVGKRKNNKLQHNVYGDSNIYSLRKRHKRLPEKAAGECDFFESLPDDLVISIFCKLSSSATSPSDFVNVLITCRRLNSLGLHSLVLSKASPRTFSIRAKNWCDSAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVISAGAAARQWLTWNIHPLRQFAGSAAGCPLLSDFGCNVPMPEAHPASRFLSEWFAARDASPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECTPVERWLEDDGDDVVDDGVDADAVMAVDS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04536 390 Gene3D Tetratricopeptide repeat domain 111 262 IPR011990 GO:0005515
Adu03g04536 390 ProSiteProfiles Zinc finger MYND-type profile. 319 361 IPR002893 -
Adu03g04536 390 Pfam MYND finger 321 361 IPR002893 -
Adu03g04536 390 SUPERFAMILY HCP-like 122 241 - -
Adu03g04536 390 SUPERFAMILY HIT/MYND zinc finger-like 316 366 - -
Adu03g04536 390 Gene3D - 312 365 - -
Adu03g04536 390 SUPERFAMILY F-box domain 53 117 IPR036047 GO:0005515
Adu03g04536 390 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 43 390 - -
Adu03g04536 390 PANTHER MYND DOMAIN-CONTAINING 43 390 IPR044508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04536 Adu-Chr3 134731435 134733241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04536 - - gmx:100798174 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04536 03 134731435 134733241 Adu03g04536 03 134731435 134733241 ECH
Adu10g00675 10 8026409 8028223 Adu03g04536 03 134731435 134733241 PCT