Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03039 ATGGCTTCCAACAAGAGTAGTAGTACTCATCAAGCATTAGCATTGCTCCTCTTCTTCCTCCTCACCCTCTCCTCTGCACATGCCAAAGGTGGCATAGCCATCTACTGGGGCCAGAACAATGGCGACGGTACCTTAACCTCCACATGTGACACCGGAAACTTTGAGATTGTGATCCTCGCCTTTCTCTACACTTTCGGTTGTGGCAGAACTCCAGATTGGAACTTTGCTGGCCACTGTGGGCCATGGTCCCCTTGTGACAAACTCGAACCAGAAATTAAACATTGCCAAAGCAACGGTGTGAAGGTGTTCCTCTCCCTTGGAGGAGCCGTTGGGCCTTACTCCTTATGCTCGCCGGACGATGCCAGGAACGTCTCCGACTACCTTTACAAGAACTTCCTCACTGGCCAAAAGGGTCCATTAGGGAGTGTGTACCTTGATGGCATTGATTTCGACATTGAAGGTGGTGGTGTGAACCTTTATTGGGATGACTTAGCTAGAGAACTCGATGCACGCAGAAAGCAAGACAGGTACTTTTACTTGTCGGCAGCACCACAATGTTTCTTCACAGATTACTACCTTGATACCGCCATTAGAACTTGGCTTTTCGATTACATATTCGTCCAGTTCTACAACAACCCTCCATGCCAATATAGTAACGGCGACGCATCTCTGCTCTTATCTTCTTGGAATACATGGACCTCCTATGTGAAGCTCAATAACACCGTGTTTATGGGGCTACCCGCTGCACCTGATGCAGCTCCCAGCGGTGGCTATATTTCACCGCAAGATCTGTGTACTAAGGTTCTTCCAATCATCAAGCACACTCCTAACTATGGTGGCGTCATGCTATGGGATAGGTTCCGCGATGTTACTAACCACTACAGCGATCAAATCAAGGATTGTGTTATAGTTGATGATAGTGTTAGGGTTTCACAAACATTGATGGCAACGTTATCAAACACTATAACTGAATGTGTATCTGCAGCTTTCAACCGCATCATGCCGAAACTAAGACCCTTCTAG 1023 0.4721 MASNKSSSTHQALALLLFFLLTLSSAHAKGGIAIYWGQNNGDGTLTSTCDTGNFEIVILAFLYTFGCGRTPDWNFAGHCGPWSPCDKLEPEIKHCQSNGVKVFLSLGGAVGPYSLCSPDDARNVSDYLYKNFLTGQKGPLGSVYLDGIDFDIEGGGVNLYWDDLARELDARRKQDRYFYLSAAPQCFFTDYYLDTAIRTWLFDYIFVQFYNNPPCQYSNGDASLLLSSWNTWTSYVKLNNTVFMGLPAAPDAAPSGGYISPQDLCTKVLPIIKHTPNYGGVMLWDRFRDVTNHYSDQIKDCVIVDDSVRVSQTLMATLSNTITECVSAAFNRIMPKLRPF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03039 340 PANTHER ENDOCHITINASE 11 299 - -
Adu09g03039 340 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Adu09g03039 340 Gene3D Glycosidases 27 316 - -
Adu09g03039 340 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 301 IPR001223 GO:0005975
Adu09g03039 340 SUPERFAMILY (Trans)glycosidases 29 298 IPR017853 -
Adu09g03039 340 CDD GH18_hevamine_XipI_class_III 30 300 IPR045321 -
Adu09g03039 340 PANTHER III ACIDIC ENDOCHITINASE, PUTATIVE-RELATED 11 299 - -
Adu09g03039 340 Pfam Glycosyl hydrolases family 18 32 289 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03039 Adu-Chr9 117989201 117991662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03039 16 298 Glycoside Hydrolase AT5G24090 49.481 8.37e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03039 K01183 - gmx:547449 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03039 09 117989201 117991662 Adu09g03039 09 117989201 117991662 ECH
Adu05g03459 05 107065961 107066977 Adu09g03039 09 117989201 117991662 PCT