Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03459 ATGGCTTCAAAACCACCACCACTGTCCCTCCTCTTCATTGCTCTCTCCATGCTCTCTTCCACCACCACCACCATCAGCTCCGGCCCCGGTATCGCCATCTACTGGGGCCAAAACGGCAAAGAAGGCACCTTACAACAAGCATGCGCCACAAACAACTACAAAATCGTAATCCTCGCATTTCTTACCGTCTTTGGCAGCGGCCGAACTCCGAAATGGAACTTTGCCGGCCACTGTGGCGATTGGAGCCCCTGCACCAAACTAGCCCCACAAATCCACTACTGCCAGAGCCAAAACATCAAGGTGTTCCTCTCCCTCGGCGGCGGCATCGGACACTACTCTCTCTCCTCGCCGCAAGACGCTAGGGAAGTTGCGCTCTATCTTTTTGAAAGCTTCCTCAGTGGCCAACACGGACCACTGGGAACCGTGGCATTAGATGGCATTGACTTTGACATCGAAGAAGGGTCAAATCTTTTCTACGATGACTTAGTCAAAGCCATCAATGCATTCTCCACAAAGGAGAAAAGAATTTACCTATCTGCGGCGCCGCAATGTCCGTACCCAGATCACTACCTCGATAAAGCAATCAAAACTGGATTATTTGATTATATTTGGGTTCAATTCTATAACAACCCTCCATGCCAATACTCAAATGGAAACCCTAAGAAACTTTTCGAGTATTGGGACACGTGGACATCGTCGGTTTTGCCGAATAACACTGTCCTTTTGGGGCTTCCGGCGGCGCCTCATGCTGCCGGAAGTGGGTTCGTAGCTGCTGAGGTTGTGGCGGATGAAATTCTTCCGCACATAAGACATGGTTCAAACTATGGAGGGGTTATGCTTTGGAGCAGATACTATGATGTTCAAACCAACTTCAGTGAGAAGATTAAGGGTAGCTTGATGATGAGATCTGCGTTGAAGTTAGTGAAAGCAATTGGAGATGCAATATATGAAGGCCTGTTTTCCATTTTGAACCGTCCTTATGTGCCTAAATCTGCTTCACTTAGGGCTGATGTTTGA 1017 0.4838 MASKPPPLSLLFIALSMLSSTTTTISSGPGIAIYWGQNGKEGTLQQACATNNYKIVILAFLTVFGSGRTPKWNFAGHCGDWSPCTKLAPQIHYCQSQNIKVFLSLGGGIGHYSLSSPQDAREVALYLFESFLSGQHGPLGTVALDGIDFDIEEGSNLFYDDLVKAINAFSTKEKRIYLSAAPQCPYPDHYLDKAIKTGLFDYIWVQFYNNPPCQYSNGNPKKLFEYWDTWTSSVLPNNTVLLGLPAAPHAAGSGFVAAEVVADEILPHIRHGSNYGGVMLWSRYYDVQTNFSEKIKGSLMMRSALKLVKAIGDAIYEGLFSILNRPYVPKSASLRADV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03459 338 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 302 IPR001223 GO:0005975
Adu05g03459 338 Pfam Glycosyl hydrolases family 18 31 285 IPR001223 GO:0005975
Adu05g03459 338 Gene3D Glycosidases 29 300 - -
Adu05g03459 338 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Adu05g03459 338 SUPERFAMILY (Trans)glycosidases 26 294 IPR017853 -
Adu05g03459 338 PANTHER ENDOCHITINASE 10 298 - -
Adu05g03459 338 PANTHER ACIDIC ENDOCHITINASE 10 298 - -
Adu05g03459 338 CDD GH18_hevamine_XipI_class_III 29 297 IPR045321 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03459 Adu-Chr5 107065961 107066977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03459 10 299 Glycoside Hydrolase AT5G24090 49.829 6.87e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03459 K01183 - gmx:547449 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03459 05 107065961 107066977 Adu09g03039 09 117989201 117991662 PCT