Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02350 ATGTGGCCGTTCAACAGAAAAGGGCCTTCTGGATTCTCATCTTCTTCTACCGCCGAAGAGGTCACCGCAGGCATCGATGCTACTGGCCTCACTGCCATCGTCACAGGAGCCAGCAGTGGAATTGGCTCTGAGACTGCGCGTGTTCTTGCTTTGCGCGGTGCTCATGTCGTTATGGGGGTCAGAAACTTGACGGCTGCTAAACAAGTTCAACAATCAATACTCAAGGACAATCCCTCTGCCAAACTTGATGCCATGGAGTTAGATCTCAGTTCAATGGAATCTGTCAAGAAATTTGCATCACAATATAAATCCTCTGGTCGTCCTCTCAACATATTAATAAACAATGCTGGAATTATGGCATGCCCCTTCACGCTCTCCAAAGACAACATTGAACTACAGTTTGCCACAAATCACATCGGTCATTTTCTTTTGACAAATCTTTTGTTGGATACAATGAAGAAAACATCACGCCAGAGTAAGAGAGAAGGAAGAATTGTTAATGTGTCCTCCGAGGCTCACCGTTTTACTTATTCTGAAGGAATTCGTTTTGACAAAATCAACGACGAATCAAGTTACCACAGCTGGCGTGCTTATGGGCAGTCCAAGCTAGCAAACATCTTACATGCTAATCAACTCACAACACTTCTTAAGGAAGACGGGGCTGATATTACTGCGAATTCTCTTCATCCGGGAACCATTGCCACCAACCTTTTCCGTCATATGGGTGTGGCCAATGGTATAGTTAATGCAATTGGGAGACTTGTGCTTAAAAATGTACAGCAGGGAGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAGTTAGTGGCAAATACTTCTCTGATAGCAATCTGTCCAAAACAACCTCCCATGGAACTGATGCTGATTTGGCTAAGAAACTCTGGGATTTTAGTATGAATTTGATCAAGTAG 942 0.4416 MWPFNRKGPSGFSSSSTAEEVTAGIDATGLTAIVTGASSGIGSETARVLALRGAHVVMGVRNLTAAKQVQQSILKDNPSAKLDAMELDLSSMESVKKFASQYKSSGRPLNILINNAGIMACPFTLSKDNIELQFATNHIGHFLLTNLLLDTMKKTSRQSKREGRIVNVSSEAHRFTYSEGIRFDKINDESSYHSWRAYGQSKLANILHANQLTTLLKEDGADITANSLHPGTIATNLFRHMGVANGIVNAIGRLVLKNVQQGAATTCYVALHPQVKGVSGKYFSDSNLSKTTSHGTDADLAKKLWDFSMNLIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02350 313 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Adu09g02350 313 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Adu09g02350 313 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Adu09g02350 313 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Adu09g02350 313 PANTHER RETINOL DEHYDROGENASE 2 313 - -
Adu09g02350 313 Gene3D - 22 313 - -
Adu09g02350 313 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 2 313 - -
Adu09g02350 313 Pfam short chain dehydrogenase 31 177 IPR002347 -
Adu09g02350 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 290 IPR036291 -
Adu09g02350 313 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02350 Adu-Chr9 110732468 110734442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02350 31 183 Acyl Lipid Metabolism Gene Families AT1G62610 30.625 8.06e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02350 - - gmx:100784001 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02350 09 110732468 110734442 Adu09g02350 09 110732468 110734442 ECH
Adu05g03401 05 106398600 106402843 Adu09g02350 09 110732468 110734442 PCT