Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03401 ATGTGTTCTTCTGGATTCTCAGCTTCTTCAACTGCTGAAGAAGTTACTCATGGAATCGATGGGGTTGGCCTCACTGCTATTGTCACAGGAACCACAAGAGGCATTGGCGTAGAGACTGCAAGAGTTCTTGCTCTGCGTGGTGTGCACGTGATTATGGCGGTGAGAAACATGAACGCTGCAAAAGATGTCAAAGAAGCAATTCTTAAGGAGATTCCAACAGCTAAGGTTGATGCCATGGAATTAGACCTTAGTTCAATGGAATCTGTCCGCAAATTTGTGTCAGATTTCAATTCCTCTGGTCTCCCACTCAACATCCTAATAAACAATGCAGCAATTCTGGCAATTCCTTTTACTCTGTCCAAAGACAACATTGAACTACAATTTGCCACAAATCATATAGGTCATTTTCTTTTGACAAATCTTTTGTTAGATACCATGAAGAAAACAGCTTATGAAAGTAAGAAAGAAGGAAGAATTATTAATATCTCCTCGGACGGTCACCGATACACATATGCCGAAGGAATTCAATTTGATACAAACAATGATAAATCAAGTTACAACATGTGGTATGCATATGGCCAATCAAAGCTTGCCAACATATTACATGCCAATGAGCTTGCAACACGTCTTAAGGAAGAAGGGATAGATATAACTGCTAATTCTCTTCATCCGGGAGCTATTGTCACCAATATTTTAGATCCTCATCTTCTTGATTCTATACCAGCTGAGCTAATTAATTCTCTTGGGAAATATGAGATTAAAACCCTCCAGCAAGGAGCAGCAACAACATGCTATGTAGCATTGCATCCACAAGTGAGGGGAATTAGTGGCCAATATTTCTCAGATTGTAATGTGTCCAAGCCAAGCACCCATGGAACTAACACTCTTATGGCCAAGAAACTCTGGGATTTATCCATGAAATTAACTCATCAATGA 936 0.3985 MCSSGFSASSTAEEVTHGIDGVGLTAIVTGTTRGIGVETARVLALRGVHVIMAVRNMNAAKDVKEAILKEIPTAKVDAMELDLSSMESVRKFVSDFNSSGLPLNILINNAAILAIPFTLSKDNIELQFATNHIGHFLLTNLLLDTMKKTAYESKKEGRIINISSDGHRYTYAEGIQFDTNNDKSSYNMWYAYGQSKLANILHANELATRLKEEGIDITANSLHPGAIVTNILDPHLLDSIPAELINSLGKYEIKTLQQGAATTCYVALHPQVRGISGQYFSDCNVSKPSTHGTNTLMAKKLWDLSMKLTHQ 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03401 311 CDD retinol-DH_like_SDR_c_like 23 302 - -
Adu05g03401 311 Gene3D - 20 311 - -
Adu05g03401 311 PANTHER RETINOL DEHYDROGENASE 2 308 - -
Adu05g03401 311 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 308 - -
Adu05g03401 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 288 IPR036291 -
Adu05g03401 311 Pfam short chain dehydrogenase 25 232 IPR002347 -
Adu05g03401 311 PRINTS Glucose/ribitol dehydrogenase family signature 25 42 IPR002347 -
Adu05g03401 311 PRINTS Glucose/ribitol dehydrogenase family signature 101 112 IPR002347 -
Adu05g03401 311 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Adu05g03401 311 PRINTS Glucose/ribitol dehydrogenase family signature 192 211 IPR002347 -
Adu05g03401 311 PRINTS Glucose/ribitol dehydrogenase family signature 215 232 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03401 Adu-Chr5 106398600 106402843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03401 23 241 Lipid Metabolism Gene Families AT1G67730 26.432 1.92e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03401 - K19329 cam:101490020 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03401 05 106398600 106402843 Adu09g02350 09 110732468 110734442 PCT