Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02335 ATGAAGCACTCTCCAAAACCTTGCTACGTGATTGGTGTGATATCCGTGGTTGTGATACTGGGATCAGTAGCAGAATGCAGAAGATTTAACGGCATTGAATATCCTGCAATCAACTGCAGAAAGCACAGTGCGGTATTGACTGATTTTGGTGGCGTTGGTGATGGAAAAACTTCCAACACAAAGGCATTTAAATATGCAATAAGCAACCTGAGCCACTATGCATCTGATGGTGGTGCACAGCTTGTTGTGCCACCTGGCAAATGGCTCACTGGAAGCTTTAATCTCACAAGCTATTTCACTCTCTTTCTCCAAAAGGGTGCTCTCATTCTTGCATCTCAGGATGAATCAGAATGGCCTCCACTTCCTGTTCTACCGTCTTATGGAAGGGGAAGAGATGCTCCTGATGGAAGATTTAGCAGCCTCATTTTTGGAACTAACCTCACTGATGTTGTGATCACCGGTGCTAATGGCACAATTGACGGGCAAGGGTCATATTGGTGGACCAAGTTCAAACAGAACCAAACCAAACTGACTAGACCATACTTGATAGAGATCATGTACTCTAATCAAATCCAGATTTCAAATCTCACTCTGCTCAATTCTCCATCCTGGTTTGTTCATCCGATATACAGCAGTAATATAATAATTCAAGGGCTTACGATTGTTGCACCAGTTGACTCTCCCAACACAGATGGAATAAACCCAGATTCATGCAGAAACACTAGGATTGAAGACTGCTACATTGTATCGGGAGATGACTGCATTGCAGTGAAGAGTGGGTGGGATGAATACGGAATCAAATTCGGGAAGCCAACGGAACACGTGATCATCAGGAGACTGACATGCATATCCCCCGACAGCGCCATGATTGCATTAGGCAGTGAAATGTCCGGTGGCATCCGAGATATGAGGGCTGAAGACATCACGGCCATCAACACGCAATCGGCGGTTAGAATCAAGACAGCAATTGGCAGAGGAGGGTATGTTAAGGACATATTTGTCAAGGGAGCTCAATTGCACACCATGAAGTATGTCTTCTGGATCACCGGTTCATATGGCTCGCATCCTGATAATGGTTTTGATCCAAACGCGCTTCCTCAAATCACTGGGATAAACTACAGAGACTTCACTGCTGACAATGTCACATACTCAGCAAGACTCGAAGGCATCTCCAAGGACCCCTTTAGTGGAATATGCATTTCAAATGTCGATATTCGACTCAGTCAAGAGAAGAAGAAGCTTCAATGGAATTGCACGGATGTCTCTGGAGTTACAAAAAATGTCACTCCTCAGCCTTGTGATTTGCTTCCTCTCAAGACAGAAGCCCATGACTGTCCTTATCCAACTGACAAACTCCCCATTGATAGACTTCAACTCCAGACTTGTTCACTTTAA 1395 0.4459 MKHSPKPCYVIGVISVVVILGSVAECRRFNGIEYPAINCRKHSAVLTDFGGVGDGKTSNTKAFKYAISNLSHYASDGGAQLVVPPGKWLTGSFNLTSYFTLFLQKGALILASQDESEWPPLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGANGTIDGQGSYWWTKFKQNQTKLTRPYLIEIMYSNQIQISNLTLLNSPSWFVHPIYSSNIIIQGLTIVAPVDSPNTDGINPDSCRNTRIEDCYIVSGDDCIAVKSGWDEYGIKFGKPTEHVIIRRLTCISPDSAMIALGSEMSGGIRDMRAEDITAINTQSAVRIKTAIGRGGYVKDIFVKGAQLHTMKYVFWITGSYGSHPDNGFDPNALPQITGINYRDFTADNVTYSARLEGISKDPFSGICISNVDIRLSQEKKKLQWNCTDVSGVTKNVTPQPCDLLPLKTEAHDCPYPTDKLPIDRLQLQTCSL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02335 464 PANTHER PECTIN LYASE-RELATED 18 463 - -
Adu09g02335 464 SUPERFAMILY Pectin lyase-like 39 459 IPR011050 -
Adu09g02335 464 PANTHER ENDO-POLYGALACTURONASE-LIKE PROTEIN 18 463 - -
Adu09g02335 464 Gene3D - 29 431 IPR012334 -
Adu09g02335 464 Pfam Glycosyl hydrolases family 28 141 422 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02335 Adu-Chr9 110397005 110398792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02335 32 464 Glycoside Hydrolase AT3G48950 70.023 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02335 - - adu:107466830 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02335 09 110397005 110398792 Adu09g02335 09 110397005 110398792 ECH
Adu05g03428 05 106728081 106730812 Adu09g02335 09 110397005 110398792 PCT