Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01044 ATGGCATTACTCTCATTCTCCTCACTCTGCCTCACAATTTTTGCCATCTATTCTTCATCTTTATCTGCTGAATCACGTGTCTCACCAATTGCACCAATCTCTTCTCTTATTAGCAAAACCCTTTTCGACTCAATTTTTTTACATAAAGATGACAATGCTTGCCCTGCTAGAAACTTTTACACTTATGAATCCTTCGCTGAGGCAACCTCGAGCTTCCCCGCGTTTGGCTCGACCGGATGCTCGGCCACACGGAAGCGCGAGGTTGCCGCATTTCTTGCACAGATCTCACATGAAACCACAGGTGGTTGGGCTACTGCACCTGATGGACCATATGCTTGGGGGCTATGCTTCAAGGAAGAAGTTAGTCCTCAAAGTGATTATTGTGATTCCTCCAATAAAGAATGGCCCTGTTATCCTGGAAAGAGTTACAAAGGCAGAGGACCAATTCAACTTTCCTGGAATTACAACTATGGGCCAGCAGGGAAGGCCTTGGGATTCGATGGTCTTAAGAACCCAGACATTGTGTCAAACAATTCAGTAATTGCATTCAAAACAGCACTCTGGTTTTGGATGACAGAGCAGAAACCAAAACCTTCTTGCCACAACGTCATGGTTGGGAATTACGTGCCAACAGCATCTGATAGAGCAGCAAATAGAACCTTAGGGTTTGGGTTGGTTACTAACATAATCAACGGTGGACTTGAATGTGGAGTTCCGGATGATGCAAGAGTCAATGATCGGATTGGATACTTTCAAAGATATGCTAAGTTGTTTAATGTAGATACTGGACCTAACTTAGGATTGTGCATATCAGAAATCCTTCTAAGCTTATATTGTTTTTGGTGTATCCTTTTTTTATTTCTATAA 867 0.4268 MALLSFSSLCLTIFAIYSSSLSAESRVSPIAPISSLISKTLFDSIFLHKDDNACPARNFYTYESFAEATSSFPAFGSTGCSATRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSSNKEWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLKNPDIVSNNSVIAFKTALWFWMTEQKPKPSCHNVMVGNYVPTASDRAANRTLGFGLVTNIINGGLECGVPDDARVNDRIGYFQRYAKLFNVDTGPNLGLCISEILLSLYCFWCILFLFL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01044 288 Gene3D - 36 267 - -
Adu09g01044 288 Gene3D Endochitinase, domain 2 119 177 - -
Adu09g01044 288 ProSitePatterns Chitinases family 19 signature 2. 181 191 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu09g01044 288 CDD chitinase_GH19 37 267 - -
Adu09g01044 288 SUPERFAMILY Lysozyme-like 33 267 IPR023346 -
Adu09g01044 288 PANTHER CHITINASE-RELATED 9 267 - -
Adu09g01044 288 Pfam Chitinase class I 36 266 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu09g01044 288 PANTHER OS05G0138200 PROTEIN 9 267 - -
Adu09g01044 288 PIRSF Endochitinase 4 273 IPR016283 GO:0004568|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01044 Adu-Chr9 19558902 19560627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01044 13 266 Glycoside Hydrolase AT4G01700 75.875 2.82e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01044 - - gmx:100784196 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01044 09 19558902 19560627 Adu09g01044 09 19558902 19560627 ECH
Adu06g00538 06 6463265 6464808 Adu09g01044 09 19558902 19560627 PCT