Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00538 ATGGCTTTTTCAACATTGCTCTCTTTTACTCTCTTCCTCTGTGTCTGTTTCGCTTCTTCTTTGGAAGCGAAACCAATCTCTTCTCTGATTAGAAAGAAGCTTTTTGATACCATGTTCCTACATAAAGATGACAATGCATGCCCTGCTAAGAACTTCTACCCTTACAAGGCCTTCATTCGCGCCGCCAAAACCTTCCCTGAATTCGGCACCACCGGCAGTTTAGACACACGGAAGCGTGAGATTGCTGCATTTCTTGCTCAAATTTCGCATGAGACCACTGGTGGATGGGCTACTGCACCTGATGGTCCATATGCCTGGGGTCTCTGCTTTAAGGAAGAGATTAATCCTCAGAGTAACTACTGTGATTCTACTAACAAACAATGGCCTTGTTTCCCAGGAAAATCTTACCATGGAAGAGGACCCATTCAACTTTCTTGGAACTACAATTATGGTCCAGCAGGGAAGGAGTTGGGATTTGATGGGTTGAGGAAGCCTGAGATTGTGTCAAACAATTCAGTGATTGCATTCAGAAGTGCTCTGTGGTTTTGGATGAGAGAGACAAGAGGAACACTTTCATGCCACAATGTTATGGTTGGAAAATATGTGCCTTCAGAAGCCGACATAGCAGCAAACAGAACAGCTGGTTATGGCTTGGTTACTAACATCATCAATGGTGCACTTGAATGTGGAATCCCCAATGATCCAAGGTCAACGATAGGATTGGATTTTTCAAAAGATATACCAACTTGTTCAACGTCGATACTGGACCTAACTTGGATTGTGCATTTCAGAAACCCTTGTAAATAA 807 0.4325 MAFSTLLSFTLFLCVCFASSLEAKPISSLIRKKLFDTMFLHKDDNACPAKNFYPYKAFIRAAKTFPEFGTTGSLDTRKREIAAFLAQISHETTGGWATAPDGPYAWGLCFKEEINPQSNYCDSTNKQWPCFPGKSYHGRGPIQLSWNYNYGPAGKELGFDGLRKPEIVSNNSVIAFRSALWFWMRETRGTLSCHNVMVGKYVPSEADIAANRTAGYGLVTNIINGALECGIPNDPRSTIGLDFSKDIPTCSTSILDLTWIVHFRNPCK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00538 268 PANTHER OS05G0138200 PROTEIN 22 238 - -
Adu06g00538 268 Gene3D - 33 240 - -
Adu06g00538 268 Gene3D Endochitinase, domain 2 112 170 - -
Adu06g00538 268 ProSitePatterns Chitinases family 19 signature 2. 174 184 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu06g00538 268 Pfam Chitinase class I 30 238 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu06g00538 268 PANTHER CHITINASE-RELATED 22 238 - -
Adu06g00538 268 CDD chitinase_GH19 30 238 - -
Adu06g00538 268 SUPERFAMILY Lysozyme-like 26 235 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00538 Adu-Chr6 6463265 6464808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00538 25 238 Glycoside Hydrolase AT4G01700 71.963 4.66e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00538 - - gmx:100784196 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00538 06 6463265 6464808 Adu09g01044 09 19558902 19560627 PCT