Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01040 ATGATTAGCAACGTGATAGAGCATAGTTATCAATTCAAAACTGAAAAGTCAGGTGACCAGATAGACACGAGTGTTGACAGACGGAACCTTCGAACTGGCAGAAATCTGTTATTGGGCCAAATAAAGGGTCATATGAAGAGACCTTCAGCTCTGGTGGATGTGTTTCTGGTACTAGCATTGTTTAGTTGCAACTCATGGACAACGCGGAGCAGCTCAGAAAGCTGCAATCCAAATTATGTTGAGGACATTCGACCTCATAGTGTTAGTATTACTGAATTTGGAGCCGTTGGAGATGGAATCACTCTCAACACAAAAGCATTTCAGAATGCCATTTTCTACCTAAATTCTTTCGCAGACAAAGGCGGAGCGAAGCTTTTTGTCCCAGCTGGCCAATGGTTAACCGGAAGTTTTGATCTTATCAGCCACCTAACTTTGTGGTTGGACAAGGATGCAGTAATTCTTGGATCAACGAACTCTGATGATTGGCCCATTGTGGATTCCCTACCCTCATATGGTCGAGGAAGGGAGTTGCCTGGTGGAAGGCATAAAAGCCTCATTTATGGTAACAATTTGACTGATGTTATCATTACAGGTAATAATGGAACTATAGATGGTCAAGGGAGTATCTGGTGGAGCAGGTTTCGGAACAAAACATTGGACTATACACGTCCCCATTTGGTTGAATTGATGAATTCATCTGGGATTCTCATTTCAAATTTAACCTTCTTGAATTCACCATTTTGGAATATTCACCCTGTATATTGCAGCCATGTTACAGTTCAAAATGTCACAATCCATGCTCCCTCCAGTTCTCCGAATACAGATGGGATAAATCCAGATTCTTCAGATGATATATGCATTGAAGATTGTTACATAAGCACCGGCGACGATCTGGTTGCCATCAAAAGTGGTTGGGATGAATATGGAATTTCGTTTGGTCGTCCTAGTACAAACATTCTCATCCGTAGGCTCGTTGGGAAAACAACAAGCGCAGGAATCGCTATTGGAAGTGAGATGTCTGGAGGTGTTTCAGATGTTTTTGCAGAGGATATTTACATTTTTGATTCGCATACAGGGATTGGAATAAAGACTGCTCGCGGAAGGGGTGGTTATGTTCGAAATGTCTATATCTCAAAAATGACATTGGATAATGTAGATATTGCTATTAGGCTCAATGGCTTATACAAAGAACATCCTGATGATGATTACAACCCAGATGCTTTGCCTGTAATAGAAAAGATTACTATCAAGGATGTGATAGGAGAAAATATCAAACGCGCAGGCCTTATACAAGGTATAAAAGGTGACAATTTTGTCAACATTTGCCTATCAAATATCACACTTAGTGTGAGCTCAAAAACTCCATGGAACTGCTCGAACGTTGAAGGATACTCGGATTTGCTTTCGCCTGAAGCTTGTGATCCTCTCGAAGAAAGTATATTCCCGGAGCATGTTTCAGATTGTTACAATCCAGAAAATCCATTAAGGAGTTCAAGCACTAGAAATCAAGaagcaaaatacagaagaaAACATGAATTGAAGGACGTTAAAGGAAAGGAAGTTAAGGAACCGACAAGAAAAGGGCAGGAAGGTGGACCTCAGCAGCACAAGATTGCAAGGAAGATGGAAGAGCATGTGGATAAGTTTGCAAGAGATGCGCAGGGTAAGGACCCAAATAAGAACGGATGGTCCAAGAAAATAGAAATACCAGTGGTAAAAGATAATGTTACTTGGCTACAAAGGAGTATTGTGGGAAGCACAAAGAAGATGATCAATTTTCAGGCACTACGTCAAAAGATTCATAATGAATGGCAGTGCGTAATGCATATAAGGGAGTTGGATGCATACAAAGCAATGCTAACGTTTGACACAGGTAGCAGTGAGGTGTATAGAGAAAAATGTTTTCCAGAGACCACGTTTGACCAAGGAGGTAAGCATATAGTGGCCACGGAAAATATACAGCAGGATGATATAAGGGAGGCAGCTAGTGGTGGAGCTGAGCCGAGGGTGGCAAGATGGGATTCGGCGGCGGGACTCATGAAGAAGAAACAATCGAATGAGGAACAAGACAAGGACAAAATAGGAATTCTGCCCTCTGAATTGAATGAGTGA 2112 0.4134 MISNVIEHSYQFKTEKSGDQIDTSVDRRNLRTGRNLLLGQIKGHMKRPSALVDVFLVLALFSCNSWTTRSSSESCNPNYVEDIRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDDWPIVDSLPSYGRGRELPGGRHKSLIYGNNLTDVIITGNNGTIDGQGSIWWSRFRNKTLDYTRPHLVELMNSSGILISNLTFLNSPFWNIHPVYCSHVTVQNVTIHAPSSSPNTDGINPDSSDDICIEDCYISTGDDLVAIKSGWDEYGISFGRPSTNILIRRLVGKTTSAGIAIGSEMSGGVSDVFAEDIYIFDSHTGIGIKTARGRGGYVRNVYISKMTLDNVDIAIRLNGLYKEHPDDDYNPDALPVIEKITIKDVIGENIKRAGLIQGIKGDNFVNICLSNITLSVSSKTPWNCSNVEGYSDLLSPEACDPLEESIFPEHVSDCYNPENPLRSSSTRNQEAKYRRKHELKDVKGKEVKEPTRKGQEGGPQQHKIARKMEEHVDKFARDAQGKDPNKNGWSKKIEIPVVKDNVTWLQRSIVGSTKKMINFQALRQKIHNEWQCVMHIRELDAYKAMLTFDTGSSEVYREKCFPETTFDQGGKHIVATENIQQDDIREAASGGAEPRVARWDSAAGLMKKKQSNEEQDKDKIGILPSELNE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01040 703 SMART pbh1 372 393 IPR006626 -
Adu09g01040 703 SMART pbh1 343 364 IPR006626 -
Adu09g01040 703 SMART pbh1 316 337 IPR006626 -
Adu09g01040 703 SMART pbh1 255 281 IPR006626 -
Adu09g01040 703 SMART pbh1 186 239 IPR006626 -
Adu09g01040 703 SMART pbh1 282 314 IPR006626 -
Adu09g01040 703 PANTHER PECTIN LYASE-RELATED 51 500 - -
Adu09g01040 703 Pfam Glycosyl hydrolases family 28 182 462 IPR000743 GO:0004650|GO:0005975
Adu09g01040 703 MobiDBLite consensus disorder prediction 681 697 - -
Adu09g01040 703 SUPERFAMILY Pectin lyase-like 83 475 IPR011050 -
Adu09g01040 703 Gene3D - 65 466 IPR012334 -
Adu09g01040 703 PANTHER OS07G0245200 PROTEIN 51 500 - -
Adu09g01040 703 MobiDBLite consensus disorder prediction 514 537 - -
Adu09g01040 703 MobiDBLite consensus disorder prediction 679 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01040 Adu-Chr9 19424680 19432024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01040 45 499 Glycoside Hydrolase AT3G62110 67.965 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01040 - - gmx:100786985 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01040 09 19424680 19432024 Adu09g01040 09 19424680 19432024 ECH
Adu06g00540 06 6487581 6490193 Adu09g01040 09 19424680 19432024 PCT