Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00863 ATGTCATTTCTCTTCAACAAGGGTCAAAAGATCAAGGGGACTGTGGTGTTGATGCCCAAGAATGTCTTGGACTTCGACACCATATCCTCCATCCCCAACGGTGGCGTTGCCGGGGCATTCGACGGCCTCCTCGGCACTGCCACTGACTTACTTGGCCATGCAGTTGATGATCTCACTGCCATCTTTAGCCGCCAAATTTCGCTTAAGTTGATCAGTGCTACCAAGACTGATGGAAAGGGAAATGGGAAAATTGGAAAGGAAACTTATGTAGAGAATCATCTTCCAACCTTACCCACATTGGGAGCAAGGCAAGAAGCATTCGATATTCATTTTGATTATGATGCCGAGTTTGGAATTCCAGCAGCATTTTATCTCAGAAGCTACATGCAAACTGAATTCTTCCTCGTTAGTGTTACTCTTGAAGACGTTCCAAACCATGGAACCATTCACTTTGTTTGCAACTCATGGGTCTACAACTTCAAAAATTACAAAAACGACCGCATCTTCTTTATCAACAACGTGTTTTTACCCAGTGAAACACCTGCTGCACTATTGAAGTACAGAAAAGAAGAGTTGCAGAACTTAAGAGGAGATGGAACAGGGGAGCGCAAAGAATACGATAGGATTTACGATTATGATGTCTACAATGATTTAGGTAATCCAGATCGTGGTGAAAAGTATTCTCGCCCAATCCTTGGAGGCTCTTCCACTTATCCCTATCCTCGAAGAGTTAGAACTGGTAGAAAACCAACCAAAAAAGATCCTAAAAGTGAGACTCCACCAAGGGAGACTTATGTTCCAAGAGACGAAAATTTTGGTCACTTGAAATCATCTGACTTCCTCATATATGGAATCAAATCTTTGTCTCAAAACGTGTTGCCTCTTTTCGAATCGTTGATCTTCGATTTAGACTTCACACCGAATGAGTTTGATAGCTTCGACGAAGTACGAGAACTCTACGAAGGAGGAGTCAAACTGCCCACAGATATGCTGAGTAAAATTAGTCCCTTGCCGGCGCTCAAAGAAATATTTCGGACTGATGGCGAACAAACACTCAAATTCCCACCACCTCATGTAATCAGAGTTAGCAAATCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTTGCTGGTGTAAATCCTTGTGTGATTCGACGTCTTCAAGAGTTCCCACCCCAAAGCACACTAGATGCTACCATCTACGGTGACCAAAACAGTAAAGTTTCAAAACAAGAGATGGAGACTAACCTAGATGGGCTCACAGTGGAACAGGCACTTAATGGTAATAGATTATTCATATTGGATTACCATGATGCCTTCATGCCATATCTAGAAAGGATCAACAAAATTGCAAAGGCTTATGCTACCAGAACATTCCTTTTCTTGAGTGAGAATGGGAAATTGAAGCCAGTTGCCATTGAGTTAAGTTTGCCACATCCTAGTGGAGATCAATATGGTGCTGTTAGTAAAGTCATCTTGCCTGCTTCCGAAGGTGTTGAAAGCACAATTTGGCTATTGGCCAAGGCTCATGTAATTGTCAACGACTCGTGTTATCATCAACTCATGAGCCACTGGTTAAACACACACGCAGTTATTGAGCCATTTGCCATAGCAACAAATAGGAATCTTAGTGTGCTTCACCCCATTAGTAAACTCCTACACCCTCATTATCGTGACACCATCAACATCAACGGACTTGCTCGTCAAGCACTAATCAATGCAGGTGGCATCATAGAGCAATCATTTTTGCCTGGCCCCAATTCCATAGAGATGTCTTCAGCTGTTTACAAGAATTGGGTATTCACAGACCAAGCTTTACCAGCTGATCTTGTTAAGAGGGGATTGGCCATTCAAGATCCTTCTTCACCTTATGGCCTTAACCTAGTGATAAAGGATTACCCTTATGCAGTTGATGGACTAGAGATATGGGATGCAATCAAGACATGGGTCCAAGACTATGTTTCTTTGTACTACCCTTCAGATGAAGCAGTTAAGAAAGATTCAGAACTGCAAGCATGGTGGAAGGAAGCTGTAGAGAGGGGTCATGAAGACTTAAAAGACAAGCCATGGTGGCCAAAAATGCAAAGCATTGAAGAATTGATTCAATGCTGCTCTATCATTATATGGACGGCTTCGGCGCTTCATGCCGCCGTTAACTTTGGACAGTATCCATATGGAGGTTACATCCTTAACCGTCCAACTCTAAGTAGAAGATGGATCCCGGAGAAGGGAACTAAAGATTATGATGAGATGGTGAAGAATCCTCAAAAGGCTTATTTGGGAACAATCACACCTAAGTATCAGACCCTTGTTGATCTCTCAGTGATTGAGATTTTGTCAAGGCATGCCTCTGATGAAGTGTACCTTGGGCAGAGGGAGAATCCTAACTGGACAAGTGACTCAAGGGCAATCCAAGCTTTCAACAAGTTTGGGAGCAAGTTGGCAGAGATTGAGGGTAAGATTAAAGAAAGGAACAAGGATTCCAGTTTGAGCAATAGGGTTGGACCGGTTGAACTTCCCTATACTTTGCTTCTTCCTTCTAGCACTGAAGGCTTAACTTTCAGAGGTATCCCTAACAGTATCTCCATCTGA 2598 0.4276 MSFLFNKGQKIKGTVVLMPKNVLDFDTISSIPNGGVAGAFDGLLGTATDLLGHAVDDLTAIFSRQISLKLISATKTDGKGNGKIGKETYVENHLPTLPTLGARQEAFDIHFDYDAEFGIPAAFYLRSYMQTEFFLVSVTLEDVPNHGTIHFVCNSWVYNFKNYKNDRIFFINNVFLPSETPAALLKYRKEELQNLRGDGTGERKEYDRIYDYDVYNDLGNPDRGEKYSRPILGGSSTYPYPRRVRTGRKPTKKDPKSETPPRETYVPRDENFGHLKSSDFLIYGIKSLSQNVLPLFESLIFDLDFTPNEFDSFDEVRELYEGGVKLPTDMLSKISPLPALKEIFRTDGEQTLKFPPPHVIRVSKSAWMTDEEFAREMLAGVNPCVIRRLQEFPPQSTLDATIYGDQNSKVSKQEMETNLDGLTVEQALNGNRLFILDYHDAFMPYLERINKIAKAYATRTFLFLSENGKLKPVAIELSLPHPSGDQYGAVSKVILPASEGVESTIWLLAKAHVIVNDSCYHQLMSHWLNTHAVIEPFAIATNRNLSVLHPISKLLHPHYRDTININGLARQALINAGGIIEQSFLPGPNSIEMSSAVYKNWVFTDQALPADLVKRGLAIQDPSSPYGLNLVIKDYPYAVDGLEIWDAIKTWVQDYVSLYYPSDEAVKKDSELQAWWKEAVERGHEDLKDKPWWPKMQSIEELIQCCSIIIWTASALHAAVNFGQYPYGGYILNRPTLSRRWIPEKGTKDYDEMVKNPQKAYLGTITPKYQTLVDLSVIEILSRHASDEVYLGQRENPNWTSDSRAIQAFNKFGSKLAEIEGKIKERNKDSSLSNRVGPVELPYTLLLPSSTEGLTFRGIPNSISI 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00863 865 Gene3D - 365 498 - -
Adu09g00863 865 SUPERFAMILY Lipoxigenase 176 865 IPR036226 -
Adu09g00863 865 PRINTS Plant lipoxygenase signature 141 159 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 167 188 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 206 222 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 239 258 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 307 328 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 352 368 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 391 410 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 456 480 IPR001246 GO:0016491
Adu09g00863 865 PRINTS Plant lipoxygenase signature 778 792 IPR001246 GO:0016491
Adu09g00863 865 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 2 865 - -
Adu09g00863 865 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 174 865 IPR013819 GO:0016702|GO:0046872
Adu09g00863 865 SMART LH2_4 9 172 IPR001024 GO:0005515
Adu09g00863 865 MobiDBLite consensus disorder prediction 223 269 - -
Adu09g00863 865 ProSitePatterns Lipoxygenases iron-binding region signature 1. 521 535 IPR020833 GO:0016702|GO:0046872
Adu09g00863 865 PRINTS Lipoxygenase signature 503 520 IPR013819 GO:0016702|GO:0046872
Adu09g00863 865 PRINTS Lipoxygenase signature 521 538 IPR013819 GO:0016702|GO:0046872
Adu09g00863 865 PRINTS Lipoxygenase signature 541 561 IPR013819 GO:0016702|GO:0046872
Adu09g00863 865 ProSitePatterns Lipoxygenases iron-binding region signature 2. 548 558 IPR020834 GO:0016702|GO:0046872
Adu09g00863 865 Gene3D PLAT/LH2 domain 1 175 - -
Adu09g00863 865 Gene3D - 499 864 - -
Adu09g00863 865 ProSiteProfiles PLAT domain profile. 43 171 IPR001024 GO:0005515
Adu09g00863 865 CDD PLAT_LH2 10 172 IPR042057 -
Adu09g00863 865 MobiDBLite consensus disorder prediction 251 269 - -
Adu09g00863 865 Pfam PLAT/LH2 domain 78 170 IPR001024 GO:0005515
Adu09g00863 865 Gene3D - 176 275 - -
Adu09g00863 865 PANTHER LIPOXYGENASE 2 865 IPR000907 GO:0016702|GO:0046872
Adu09g00863 865 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 8 174 IPR036392 GO:0005515
Adu09g00863 865 Pfam Lipoxygenase 184 848 IPR013819 GO:0016702|GO:0046872
Adu09g00863 865 Gene3D - 276 364 IPR027433 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00863 Adu-Chr9 13237820 13244455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00863 9 865 Acyl Lipid Metabolism Gene Families AT1G55020 56.552 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00863 K15718 - gmx:100781402 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00863 09 13237820 13244455 Adu09g00863 09 13237820 13244455 ECH
Adu08g01088 08 19645357 19648852 Adu09g00863 09 13237820 13244455 PCT