Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00591 ATGTTATTGAAAGCTTGGGTGATGCAAATGCGGTTCAAGAAGGGTTTAAGGTGCGGGAAAATTGAGCTTGCGCGGAGGGTGTTTGATGAAAGTTCTGAGAGAGATGTTGCTTTGTGGGGTGCCATGGTTGCTGGTTTTGCACACCATGGGATGCGGATTGAAGCATTGCAGTATGTGAGGTTGATGGTAGATGAAGGAATAATGCCGAATTCGGCTTTGATGATGGGTGTTCTTCACTTAGTTGGGGAGCTTGGCGCATTGCGGATAGGTCAAGAGGCTCATGCTTACTTAGTGAAGAAGAAATTTTACTATGAGCAAGTGCGAATTCGAACTGAATTGGTTGATATGTATAGTAAATGTGGGGATGTTGGTTCGGGGAGGCGAGTTTTGTCTAGCTTGGTAGAGAGAGGTATAAGTTGTTGGAGTGCTCTGATTGCGGGTTCTGTCTCGAGTGGGGGGTTTCAAAAGGCGGTGAAGTCCATGGTTAGAATGCAGCGAGAAGGGTTCCGGCCTAATCATGTCAGTGTTGCTTCTATCCTTTCGGTTTGTGCACAGTCGAGGGCTCTGAAACGGGGGAAGGAGATTCATGCTTATGCTTTAAAACATTGGTTTCTGCCTCATGTCTCTATAGCTTCTTCGTTGATAGTGTTGTACTCTAAGTGTGGTTTGATTGAATATTGTACAAACCTATTTGATGGTATGGAACGAAGGAATGTGATCTTGTGGACAGCCATGATTGATGCATATGTGGAAAATGGGTGTTTTCCTGAAGCATTTGGTGTCTTAAGGTCAATGCAATTGACAGAGTATAGGCCGGACACAGTTACCATGGCGAGGATGTTAAGTCTTTGCAGCAAACTAAAACTTGTAAAGTTTGGCAAGGAGATTCATGGGCAGTGCTTGATAAAGGGTTGTGCTCCGAACCGCTTTACTTTTGAAGCTGTTCTTTCTGTATGTGATAAAGCTGGTTTTGTTGAAGAGGCATTTAGGATCTTCAATTTACTGTCAAGGTATAAAGTTGAAGCATCCAAGGAACACTGCATTTCAATGATTCAGCTTCTTACGCGTTATGGTAAACTAGATGAGGCTCAAATATTTGTAGAAATGAGTTCTTTGTTATAG 1122 0.4314 MLLKAWVMQMRFKKGLRCGKIELARRVFDESSERDVALWGAMVAGFAHHGMRIEALQYVRLMVDEGIMPNSALMMGVLHLVGELGALRIGQEAHAYLVKKKFYYEQVRIRTELVDMYSKCGDVGSGRRVLSSLVERGISCWSALIAGSVSSGGFQKAVKSMVRMQREGFRPNHVSVASILSVCAQSRALKRGKEIHAYALKHWFLPHVSIASSLIVLYSKCGLIEYCTNLFDGMERRNVILWTAMIDAYVENGCFPEAFGVLRSMQLTEYRPDTVTMARMLSLCSKLKLVKFGKEIHGQCLIKGCAPNRFTFEAVLSVCDKAGFVEEAFRIFNLLSRYKVEASKEHCISMIQLLTRYGKLDEAQIFVEMSSLL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00591 373 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 137 171 IPR002885 -
Adu09g00591 373 Gene3D Tetratricopeptide repeat domain 15 89 IPR011990 GO:0005515
Adu09g00591 373 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 8 304 - -
Adu09g00591 373 PANTHER OS07G0578800 PROTEIN-RELATED 309 366 IPR045215 GO:0003723|GO:0009451
Adu09g00591 373 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 309 366 - -
Adu09g00591 373 PANTHER OS07G0578800 PROTEIN-RELATED 8 304 IPR045215 GO:0003723|GO:0009451
Adu09g00591 373 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 35 69 IPR002885 -
Adu09g00591 373 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 308 342 IPR002885 -
Adu09g00591 373 Gene3D Tetratricopeptide repeat domain 290 372 IPR011990 GO:0005515
Adu09g00591 373 Pfam PPR repeat 140 169 IPR002885 -
Adu09g00591 373 Pfam PPR repeat 39 67 IPR002885 -
Adu09g00591 373 Pfam PPR repeat 241 266 IPR002885 -
Adu09g00591 373 Pfam PPR repeat 212 239 IPR002885 -
Adu09g00591 373 Gene3D Tetratricopeptide repeat domain 144 289 IPR011990 GO:0005515
Adu09g00591 373 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 238 272 IPR002885 -
Adu09g00591 373 TIGRFAM PPR: pentatricopeptide repeat domain 241 274 IPR002885 -
Adu09g00591 373 TIGRFAM PPR: pentatricopeptide repeat domain 39 70 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00591 Adu-Chr9 7550322 7551721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00591 19 368 Glycoside Hydrolase AT3G49170 23.796 3.26e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00591 - - ahf:112777871 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00591 09 7550322 7551721 Adu04g02663 04 113637938 113640137 PCT