Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02663 ATGGCAGCCTCTCTCTCCCTCCAACTTCACTCCTTCCCTCCAAATCCCACCTCACCTTCGCCATCCTCCAACACCAAAATCACCTTCCAACTCTTCAACTTCAAACCACCACTCCCAAAGAAACCCCACCACACAACAGAGCCGTCCGAATTCCCCACCACCAAGAACCACCGCCATCACCATCACCACCACTACAAGAAGCTGAAACATTTCAAACAGAAAGATGCATTTCCATCCTCCTTACCCATCCACACAAAAAATCCACGCTCCATCTACAAAGACATCAAACGATTCGCGCGCCAAGACAAACTCAAAGAAGCACTTACCATTCTCGATTACGTTGACCAACAGGGAATCCCTGTCAACGCCACCACTTTCTCCACTCTCATCGCCGCCTGCATTCGCACCAAGTCGCTACAACATGGTAGAGAAGTCCACGTCCATATCCGAATCAACGGCTTCGAAAACAACGAGTTTTTGCGAACGAAGCTTGTTCACATGTACACCTCTTGCGGCGCTTTGGAAGAAGCCAAACAAATCTTTAACGAGTTACCCTGTAACAGTGTGTACCCATGGAATGCGTTGTTAAGAGGGTCTGTGATTTCGGGTAAAAAGCACTACCTTGATGTGCTTAAAGCTTATACTGAGATGAGGGCATTGGGTGTTGAGTTGAATGTGTATACTTTCACCACTGTGATCAAGAGTTTCGCCGGTGCACCTGCCCTTTTCCAGGGCCTCAAGGCTCATGGGTTGTTGATAAAGAATGGTTTGGTTGATAGTTCAATTATTAGGACGAGTTTGATTGATTTATACTTCAAGTGTGGGAGGATCAATCTTGCGCGCCGCGTGTTTGACGAAATTCCCAACAGGGATGTTGTGGTTTGGGGAGCAATGGTGGCGGGTTTTGTGCATAATAGGCTGCAGAGGGAGGCCTTGGAATATGTGAGGTGGATGGTGGAGGAAGGAGTGGAGGTTAATTCGGTTGTGGTGATGTCGGTTCTTCCTGCAATAGGGGAAGTTTCTGAGCAGCGATTGGGCAAAGAGATTCATGCTTATGTGGTGAAGACGAAGGAGTACTATAGGCGAGTGCCTATTCAGTCTGCCTTGATTGATATGTATTGCAAATGTGGGGATATGAGTTCGGCTAGGCGAGTTTTTTATAGCTCGGCGGAGAGGAATTTAGTTTGTTGGACGGCTTTAATGTCCGGTTATGCTTGGAATGGTAGGTTGGAGCAGGCACTGAGGTCGACTATTTGGATGCAGCAAGAAGGGTTCAGGCCTGATGTTGTGACAGTTGCAACTGTTCTTCCAGTATGTGCTCAGTTGAGGGCTTTGAAACAGGGGAAGCAGGTTCATGCTTATGCTTTGAAGCATTGGTTTTTGCCTAACGCGTCCATAACTAATTCGTTGATGGTAATGTACTCGAAGTGTGGCGTGATTGAATATTCCGAAAGACTATTTGACAGTATGGAGAAAAGGACAGTTATTTCATGGACAGCCATGATTGATTCATATGTAGAAAATGGTCATCATCATGAAGCACTTGATGTGATAAGGTCAATGCAATCATCAAAGCATAGGCCGGACTCAGTTGCAATAGCCAGAATGCTGAGTGTTTGTGGTGTGCTAAAACTTTTGAAGCATGGACAAGAGATTCATGCACAGCTCTTGAAAAAGGATTTTGCAAAAGTCCCTTTTGTTTCTGCAGAACTTATCAATATGTATGGGACTTTGGGAGAGGTTAATAAGGCAAAGTTGGTATTTGATGCTGTCCCTGTTAAAGGTTCAATCACATGGACTGCTCTTATTAGGGCCTATGGAAATAATGAATTGTATGAAGGTGCAATTGCTCTTTTCGATCGGATGACATCGAGAGGTTCTACTCCGACGCATTTCACTTTCGATGCAATGCTATCTATCTTTGACAGAGCTGGATTTGTTGATGATGCTTATAGGATATTCAAGTTAATGACTAGATATAAAATTGAACCATCTAAAGAACAGTTTGATATAATGGTCCGACTTCTTACCCATGATGGTCAACTGGAGAAAGCTCAAAAACTTGTACAGATGAGTTCTGTTGTATAG 2088 0.4454 MAASLSLQLHSFPPNPTSPSPSSNTKITFQLFNFKPPLPKKPHHTTEPSEFPTTKNHRHHHHHHYKKLKHFKQKDAFPSSLPIHTKNPRSIYKDIKRFARQDKLKEALTILDYVDQQGIPVNATTFSTLIAACIRTKSLQHGREVHVHIRINGFENNEFLRTKLVHMYTSCGALEEAKQIFNELPCNSVYPWNALLRGSVISGKKHYLDVLKAYTEMRALGVELNVYTFTTVIKSFAGAPALFQGLKAHGLLIKNGLVDSSIIRTSLIDLYFKCGRINLARRVFDEIPNRDVVVWGAMVAGFVHNRLQREALEYVRWMVEEGVEVNSVVVMSVLPAIGEVSEQRLGKEIHAYVVKTKEYYRRVPIQSALIDMYCKCGDMSSARRVFYSSAERNLVCWTALMSGYAWNGRLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALKQGKQVHAYALKHWFLPNASITNSLMVMYSKCGVIEYSERLFDSMEKRTVISWTAMIDSYVENGHHHEALDVIRSMQSSKHRPDSVAIARMLSVCGVLKLLKHGQEIHAQLLKKDFAKVPFVSAELINMYGTLGEVNKAKLVFDAVPVKGSITWTALIRAYGNNELYEGAIALFDRMTSRGSTPTHFTFDAMLSIFDRAGFVDDAYRIFKLMTRYKIEPSKEQFDIMVRLLTHDGQLEKAQKLVQMSSVV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02663 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 595 629 IPR002885 -
Adu04g02663 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Adu04g02663 695 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 49 688 - -
Adu04g02663 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 630 664 IPR002885 -
Adu04g02663 695 Gene3D Tetratricopeptide repeat domain 443 555 IPR011990 GO:0005515
Adu04g02663 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 325 IPR002885 -
Adu04g02663 695 MobiDBLite consensus disorder prediction 40 54 - -
Adu04g02663 695 Pfam PPR repeat 468 493 IPR002885 -
Adu04g02663 695 Pfam PPR repeat 496 524 IPR002885 -
Adu04g02663 695 Pfam PPR repeat 367 387 IPR002885 -
Adu04g02663 695 Pfam PPR repeat 265 290 IPR002885 -
Adu04g02663 695 Gene3D Tetratricopeptide repeat domain 592 661 IPR011990 GO:0005515
Adu04g02663 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Adu04g02663 695 Gene3D Tetratricopeptide repeat domain 203 361 IPR011990 GO:0005515
Adu04g02663 695 Gene3D Tetratricopeptide repeat domain 89 202 IPR011990 GO:0005515
Adu04g02663 695 Gene3D Tetratricopeptide repeat domain 362 442 IPR011990 GO:0005515
Adu04g02663 695 Pfam PPR repeat family 393 439 IPR002885 -
Adu04g02663 695 Pfam PPR repeat family 595 639 IPR002885 -
Adu04g02663 695 TIGRFAM PPR: pentatricopeptide repeat domain 265 293 IPR002885 -
Adu04g02663 695 TIGRFAM PPR: pentatricopeptide repeat domain 496 530 IPR002885 -
Adu04g02663 695 TIGRFAM PPR: pentatricopeptide repeat domain 632 665 IPR002885 -
Adu04g02663 695 TIGRFAM PPR: pentatricopeptide repeat domain 597 630 IPR002885 -
Adu04g02663 695 PANTHER OS07G0578800 PROTEIN-RELATED 49 688 IPR045215 GO:0003723|GO:0009451
Adu04g02663 695 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02663 Adu-Chr4 113637938 113640137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02663 78 690 Glycoside Hydrolase AT3G49170 27.143 7.29e-75 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02663 - - gmx:100809249 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00591 09 7550322 7551721 Adu04g02663 04 113637938 113640137 PCT