Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00474 ATGGCTAATAATCATTGCTGTTCAACTCAACTTATTGATGGAGATGGTACATTCAATGTAACTGGGATTGAAAGTTTCATGAAGGAGGTGAAATTTAGTGAATGTGGGCTTTCGTACGCTGTAGTTTCCATTATGGGTCCACAAAGTAGTGGCAAAAGCACGCTGTTAAACAATTTGTTTCGTACCAATTTCCGTGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTACTGGGATAGAGCCTTGTACCATTGTGATGGATTTGGAAGGAACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCTTTATTTGCTCTTGCTGTCTCAGATATAGTGCTAATCAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCTAATAAGCCACTCTTGAAAACTGTCTTTCAGGTTATGATGAGATTGTTTAGCCCACGCAAAACGACATTGTTGTTTGTCATACGTGACAAAACGCGGACACCACTTGAAAATTTAGAACCTGTCTTGCGAGAAGATATTCAGAAGATATGGGACTCGGTTCCTAAACCACAAGCCCACAAGGAAACCCCACTTAGTGAATTTTTTAATGTTGAAGTTACTGCTCTTTCTAGTTATGAAGAAAAAGAAGAGCAATTTAAGGAGCAGGTTGCCAACTTGAGGCAACGATTCCAGCACTCCATCGCTCCTGGTGGGCTTGCAGGGGACAGGCGAGGAGTAGTTCCTGCATCGGGCTTTTCTTTTAGTGCTCAGCAAATCTGGAAAGTCATCAAAGAGAACAAGGACCTTGACCTTCCTGCACATAAGGTAATGGTTGCCACTGTCCGATGTGAAGAAATTGCCAACGAGAAATATGCCACTTTTTCTGCAAATGAGGAATGGTGCCAATTAGAAGAAGCCGTACAATCAGGCCCTGTTCAGGGGTTTGGAAAAAAACTCAATTCACTCCTAGGTGCTTGTTTGTCAGAGTATGATCTTGAAGCCACTTATTTTGATGAAGGTGTGAGATCTGCAAAACAAAAACAACTCCAAGAAAAATTGTTGCAACTTGTCCAACCATCGTTCCTTTCTGCGCTGGGACATATAAGATCTGGAATAGTGGATAAATTCAAGGATGTATTTGACAAGGCTTTGAATAGAGGTGAAGGGTTTTCTTTGGCTGCCAAAAACTGCATTGAGTCTTCTATGGCTCAATTTGACGAAGCTTGCGCAGATGTTGTAATTGAACTAGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTGCGGCGTGACATTGATGCACATGTGGCATCTGTACGTGATGCTAAGCTTTCTGAACTGACTTCATCGTATGAGGAAAAACTTAAAGAAGCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGAAGCAAGTGGTGATACTTGGTCATCAATAAAGAAACTTCTTAGGCGTGAGACTGAATCAGCTGTCTCAGGGTTCTCTGCTGCACTTGCTGGGTTTGATATGGATGAAGATACGAGACAGAAAATGATTTCGAATATAGCAGATTATGCTAGGGGTGTAGTAGAAGGAAAGGCTAGGGATGAAGCTGGAAGAGTTCTAATCCGGATGAAGGATAGGTTTACGATGTTGTTTAGCCACGACACTGATTCAATGCCTCGTGTATGGACGGGCAAAGAAGATATCCGTACCATCACAAAGACTGCTCGCTCTGCTTCTTTGAAGTTACTGTCTGTCATGGCTGTTATTCGTTTGGATGATGGTGATACTGATAATATTGAGAAAACATTAGCCATTGCATTGATAGATTCATCAAGCAGTAATGTTACTGATAGGAGCATCACAACGGTTGATCCGCTAGCTTCTAGCACATGGGAAAAGGTACCATCCTCTAAGACATTGATTACACCTGTCCAATGCAAATCCTTGTGGAGGCAATTCAAGACAGAGACAGAATACAGTGTCTCTCAGGCCATTTCTGCACAGGAGGCCAACAAGCGTAATAACAACTGGTTACCTCCTCCATGGGCAATACTTGCTTTGATTATTCTTGGATTTAATGAATTTATGACACTCTTAAGAAATCCGTTGTATTTGCTTGTCATCTTTATTGGTTATCTTCTCATCAAAGCCCTATGGGTGCAATTGGACATTACGGGTGAATTTCGCCATGGAGCTCTGCCGGGACTCTTATCCTTGTCTACCAAATTCGTTCCAACTGTCATGAACCTTATGAAAAAACTAGCAGACGAGGGTGCAGATAACAATACTCGCAGAAATCCACCAAAAGGCGATTACAAGGCTGCTAATGATGGTAGTGCTGCATCTTCCAGTGCTTCATCAAATGTAAGTGTGCTTGACAACGGAACCAAACACAACAGAACTGAATACTCCAGTTCATCAAAATTCGAGTAG 2439 0.4227 MANNHCCSTQLIDGDGTFNVTGIESFMKEVKFSECGLSYAVVSIMGPQSSGKSTLLNNLFRTNFREMDAFKGRSQTTKGIWMARCTGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVTALSSYEEKEEQFKEQVANLRQRFQHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYATFSANEEWCQLEEAVQSGPVQGFGKKLNSLLGACLSEYDLEATYFDEGVRSAKQKQLQEKLLQLVQPSFLSALGHIRSGIVDKFKDVFDKALNRGEGFSLAAKNCIESSMAQFDEACADVVIELADWDTSKVREKLRRDIDAHVASVRDAKLSELTSSYEEKLKEALSGPVEALLDEASGDTWSSIKKLLRRETESAVSGFSAALAGFDMDEDTRQKMISNIADYARGVVEGKARDEAGRVLIRMKDRFTMLFSHDTDSMPRVWTGKEDIRTITKTARSASLKLLSVMAVIRLDDGDTDNIEKTLAIALIDSSSSNVTDRSITTVDPLASSTWEKVPSSKTLITPVQCKSLWRQFKTETEYSVSQAISAQEANKRNNNWLPPPWAILALIILGFNEFMTLLRNPLYLLVIFIGYLLIKALWVQLDITGEFRHGALPGLLSLSTKFVPTVMNLMKKLADEGADNNTRRNPPKGDYKAANDGSAASSSASSNVSVLDNGTKHNRTEYSSSSKFE 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00474 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 276 IPR027417 -
Adu09g00474 812 MobiDBLite consensus disorder prediction 779 812 - -
Adu09g00474 812 MobiDBLite consensus disorder prediction 757 812 - -
Adu09g00474 812 CDD GBP 35 241 - -
Adu09g00474 812 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 36 251 IPR030386 GO:0005525
Adu09g00474 812 MobiDBLite consensus disorder prediction 759 773 - -
Adu09g00474 812 Pfam Sey1 three-helix bundle domain 322 759 IPR046758 -
Adu09g00474 812 Gene3D - 16 244 IPR027417 -
Adu09g00474 812 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 45 280 - -
Adu09g00474 812 Coils Coil 217 237 - -
Adu09g00474 812 PANTHER PROTEIN SEY1 6 787 IPR008803 -
Adu09g00474 812 Hamap Protein SEY1 [SEY1]. 8 768 IPR008803 -
Adu09g00474 812 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 6 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00474 Adu-Chr9 5670741 5679327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00474 K22698 - gmx:100780006 1334.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01048 08 19107750 19113949 Adu09g00474 09 5670741 5679327 PCT