Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01048 ATGGCGAAGAGTGAGATTCGTTTTTCTACTCAGCTTATTGATGGAGATGGCACGTTCAATGTTGAGGGAATTGAGAAGTTCATGAAGGACGTTAAGTTAGCTGAATGCGGGCTTTCCTATGCCGTAGTTTCCATCATGGGTCCACAAAGTAGTGGCAAGAGTACGCTATTAAATAATTTGTTTGGCACTGATTTTAGAGAGATGGATGCATTTAAGGGAAGATCTCAAACAACCAAAGGAATTTGGTTGGCAAAATGTGCCGGCATAGAGCCTTGTACACTTGTGATGGACTTAGAGGGCACAGATGGAAGAGAAAGGGGAGAGGACGATACTGCATTTGAAAAGCAGAGTTCTCTTTTTGCTTTGGCTGTTTCGGATATTGTGCTGATAAACATGTGGTGTCATGACATCGGCCGTGAGCAAGCTGCAAACAAGCCACTTCTAAAAACTGTGTTTCAGGTCATGATGAGGTTGTTTAGTCCACGCAAAACAACATTGATGTTTGTCATACGTGATAAAACAAGGACACCACTAGAAAATTTAGAACCTGTCTTACGAGAAGATATTCAGAAGATTTGGGATTCTGTTCCTAAGCCACAGGCCCACAAGGAAACCCCACTGAGTGAATTTTTTAACGTTGAAGTTGTTGCTCTTTCTAGCTTCGAAGAGAAGGAAGAGCAATTCAAGGAGCAAGTTCATGAGTTGAGGCAGCGATTTGTTCATTCCATAAATCCTGGTGGGCTTGCGGGGGATCGGCGTGGAGTTGTTCCTGCTTCGGGCTTTTCTTTTAGTGCTCAGCAAATCTGGAAAGTCATCAAGGAGAACAAAGATCTTGACCTTCCCGCACACAAGGTCATGGTTGCTACTGTAAGATGTGAAGAAATTGCCAATGAGAAATATGCCCTTTTTGCTGCCAATGAGGACTGGCGTCAGCTAGAAGAGGCTGTGCAATCAGGTCCAGTTTCTGGATTTGGGAAAAAGCTCAATTCGCTTCTTGATACTTGTCTTTCAGAGTATGATGTTGAAGCCACTTATTTTGATGAAGGTGTGAGAACCGCTAAACAGAAGCACCTTCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTCCACTCTGCCCTTGGACATATAAGGATTGGAACTTTCGATAAGTTCAAGGAAGTATTTGATAAGGCTTTGAATAAAGGGGAAGGGTTTTCTGAAGCTGCTAATAATTGCACAGGGATTTTTATGGCTCAGTTTGATGAAGCCTGTGCAGATGTTGTTGTTGAAGTTGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTACGACGTGATATTGATGCACATGTTGCATCTGTACGTGCAGCTAAGTTATCGGAACTTACCACAACATATGAGGAAAAACTAAAAGAAGCTTTGTCTGGACCTATTGAAGCACTTTTTGATGGAGCTAATAATGAAACTTGGCCATCAATAAGGAAACTCTATAAGCGTGAGACTGAATCAGCTGTTTCTGGGTTTTCTGCTGCGCTTACCAGGTTTGATGCAGATGAAGAAACACAAAAGAACATGATTGTGAGTTTAGAGAATTATGCAAGAGGTTTGATAGAGACAAAAGCTAGGGATGAAGCTTGCAGAGTCCTAATACGTATGAAGGAAAAGTTCACAACATTGTTTAGTCATGATGCTGAATCAATGCCGCGTATTTGGACAGGAAGCGAAGATATTCGATCCATCACCAAGACTGCTCGATATGCTTGCCTGAAGTTGCTATCTGTTATGACCGTAATTCGTTTGGATGATAAAGATGACACTCTTAACATTGAGAATATTTTAGCAAAAGCATTGTTAGATTCACCCAATGAAAAAGAGAAGAAAATCACAACAGTTGATCCACTGGCTTCAAGCACTTGGGAAAAGGTTCCAGCTTCTAAAACATTGATCACCCCTGTCCAGTGTAAATCTTTGTGGAGGCAATTCAAGATTGAGACAGAATATACTGTGTCTCAGGCCATTGCTGCACAGGAGGCCAACAAGCGTGGTAACAACTGGTTACCTCCACCATGGGCAATTGTTGCCTTGCTTATTCTGGGATTTAACGAGTTTATGACACTTTTAAGAAATCCTTTATATTTGATTCTCATTTTTATTGGTTATCTTCTCATTAAAGCCTTGTGGGTGCAACTTGACGTTGCGGGTGATTTTCGCCATGGTGCACTAGCTGGACTCTTATCCTTGTCTACTAAGTTTCTTCCAACTATAATGAATCTTATGAGAAAGTTAGCAGAGGAGGGGGTTCCTGAAACTAACAATCCTCAGCCAACTCCATCAACAAGTACTCAAACTACTGGTAGCTCTGTGTCATCTACTGCTTCATCTAAGGTAACTTTTTTAGAATGTGGAACTGAGTACACCGCTTCATCAAAAGAAGAATAG 2421 0.4151 MAKSEIRFSTQLIDGDGTFNVEGIEKFMKDVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFGTDFREMDAFKGRSQTTKGIWLAKCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSSLFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSFEEKEEQFKEQVHELRQRFVHSINPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYALFAANEDWRQLEEAVQSGPVSGFGKKLNSLLDTCLSEYDVEATYFDEGVRTAKQKHLQEKLLQLVQPAFHSALGHIRIGTFDKFKEVFDKALNKGEGFSEAANNCTGIFMAQFDEACADVVVEVADWDTSKVREKLRRDIDAHVASVRAAKLSELTTTYEEKLKEALSGPIEALFDGANNETWPSIRKLYKRETESAVSGFSAALTRFDADEETQKNMIVSLENYARGLIETKARDEACRVLIRMKEKFTTLFSHDAESMPRIWTGSEDIRSITKTARYACLKLLSVMTVIRLDDKDDTLNIENILAKALLDSPNEKEKKITTVDPLASSTWEKVPASKTLITPVQCKSLWRQFKIETEYTVSQAIAAQEANKRGNNWLPPPWAIVALLILGFNEFMTLLRNPLYLILIFIGYLLIKALWVQLDVAGDFRHGALAGLLSLSTKFLPTIMNLMRKLAEEGVPETNNPQPTPSTSTQTTGSSVSSTASSKVTFLECGTEYTASSKEE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01048 806 Coils Coil 218 238 - -
Adu08g01048 806 MobiDBLite consensus disorder prediction 759 788 - -
Adu08g01048 806 Pfam Sey1 three-helix bundle domain 323 759 IPR046758 -
Adu08g01048 806 PANTHER PROTEIN SEY1 3 782 IPR008803 -
Adu08g01048 806 Hamap Protein SEY1 [SEY1]. 9 761 IPR008803 -
Adu08g01048 806 Gene3D - 11 246 IPR027417 -
Adu08g01048 806 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 3 782 - -
Adu08g01048 806 MobiDBLite consensus disorder prediction 763 788 - -
Adu08g01048 806 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Adu08g01048 806 CDD GBP 36 242 - -
Adu08g01048 806 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Adu08g01048 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01048 Adu-Chr8 19107750 19113949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01048 K22698 - gmx:100777656 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01048 08 19107750 19113949 Adu09g00474 09 5670741 5679327 PCT