Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00434 ATGAACGGTGGTGATGATAAGGTTGCAGCTCCGGCGGGTCCACCGCAACCGCTGGAGTGGAAATTCTCGCAGGTGTTCGGCGAACGTGCGGCCGGTGAAGAAGTTCAGGAAGTGGACATAATTTCTGCTATTGAATTTGACAAGTCCGGTGATCATCTAGCTACTGGTGATCGTGGTGGTCGAGTAGTTCTTTTTGAGAGGACAGATTCAAAAGATAATGGTGTACCACGAAGGGATTTGGAGAGGATGGACAATTCTCTTACTAGGCATCCTGAGTTTCGTTATAAAACAGAGTTTCAGAGTCATGAGCCTGAGTTTGACTATCTTAAGAGCTTGGAAATAGAAGAGAAAATCAACAAAATCAAATGGTGCCAAACAGCTAATGGTGCTCTGTTCCTTCTATCTACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAGATCAAGAAAATTTCTGACATGAATGTTGACCATTTGAAAGCAGTGGGAAATGTCTCTAGTTCAAGTAATTCCAGTAGCTCCATTCCTTACCTTGCAAATGGAGGCTTATCAATTCCACCAGGAGGCATACCTTCACTAAAATTACCTGTGGTAGTAACCAGCAATGAGACCAGTCTGATGGCTCGATGTCGTAGAGTGTATGCCCATGCGCATGATTATCACATCAATTCTATTTCAAATAACAGTGACGGTGAAACTTTCATATCGGCTGATGATTTGCGAATAAACCTTTGGAACCTGGAAATTAGCAATCAAAGTTTCAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACTGAGGTTATAACGTCGGCAGAATTTCACCCCACTCATTGCAACACACTGGCATATAGTAGTTCAAAAGGTTCAATTCGTCTTGTTGACTTGCGGCAGTCAGCGCTCTGTGATTCTCACACCAAAATATTTGAGGAGCATGAGGCCCCTGGCTCCAGATCATTTTTCACAGAGATTATAGCTTCTATCTCAGACATAAAATTTGCAAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCCTAAAGTTATGGGACATCAACATGGATTCTGGTCCAGTTGCTACATTCCAGGTTCATGAGTATTTAAGACCAAAGCTTTGTGATTTATATGAAAACGATTCAATTTTTGACAAGTTTGAGTGTTGTCTGAGTGGTGATGGATTGCGTGTTTCAACGGGTTCCTACAGTAATTTATTCCGTGTGTTTGGTTGTGCCCCCGGTAGTGCTGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGACGGCAAGTTCCAACCCCTTCAAGGCCTTCCAGATCACTGGGAACTAGTATAACACGAGTTGTAAGACGCGGAGCTGATGGAGTTGATGCAAATGGCAATTCTTTTGATTTCACAACAAAGTTGCTACACTTAGCGTGGCACCCAACTGAAAATTCAATTGCTTGTGCTGCTGCAAATAGCTTATACATGTACTATGCTTAA 1503 0.4178 MNGGDDKVAAPAGPPQPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSKDNGVPRRDLERMDNSLTRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKIKKISDMNVDHLKAVGNVSSSSNSSSSIPYLANGGLSIPPGGIPSLKLPVVVTSNETSLMARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHTKIFEEHEAPGSRSFFTEIIASISDIKFAKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGTSITRVVRRGADGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 221 248 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 249 276 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 277 305 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 306 333 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 334 361 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 362 387 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 388 414 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 469 498 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 Gene3D - 36 187 IPR015943 GO:0005515
Adu09g00434 500 SUPERFAMILY WD40 repeat-like 39 492 IPR036322 GO:0005515
Adu09g00434 500 PIRSF PPA2_B55 11 500 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 Gene3D - 195 496 IPR015943 GO:0005515
Adu09g00434 500 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 3 500 - -
Adu09g00434 500 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Adu09g00434 500 Pfam WD domain, G-beta repeat 213 249 IPR001680 GO:0005515
Adu09g00434 500 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 219 233 IPR018067 -
Adu09g00434 500 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 3 500 IPR000009 GO:0000159|GO:0019888
Adu09g00434 500 SMART WD40_4 210 249 IPR001680 GO:0005515
Adu09g00434 500 SMART WD40_4 307 357 IPR001680 GO:0005515
Adu09g00434 500 SMART WD40_4 105 145 IPR001680 GO:0005515
Adu09g00434 500 SMART WD40_4 31 66 IPR001680 GO:0005515
Adu09g00434 500 SMART WD40_4 260 300 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00434 Adu-Chr9 4948639 4955620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00434 K04354 - gmx:100799449 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00434 09 4948639 4955620 Adu07g01745 07 52592169 52599324 ECH
Adu09g00434 09 4948639 4955620 Adu09g00434 09 4948639 4955620 ECH
Adu07g01745 07 52592169 52599324 Adu09g00434 09 4948639 4955620 PCT