Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01745 ATGGACTATTCTATTAGTAGGCATCCTGAGTTCCGTTATAAAACAGAGTTTCAGAGTCATGAGCCCGAGTTTGACTATCTCAAGAGCTTGGAAATAGAAGAGAAAATCAACAAAATCAGATGGTGCCAAACAGCTAATGGTGCCCTCTTCCTTCTTTCTACAAATGATAAAACCATAAAATTTTGGAAGGTTCAAGAAAAGAAAATCAAGAAAATTTCTGAGATGAATGTTGACCCTTCAAAAGCAATGGGAAATGGCAGTATTGGTAGTTCAAGTAGTTCTAGGGCATATCTTGCAAATGGAGGAGCTCCAGATAGATCACACAATAACCTAAGCAATGACTACTCATTTCCACCAGGAGGCATTCCATCACTAAAGTTACCTGTGGTAGTAAGTAGCCAGGAGACGAGTTTATTGGCTCGGTGCCGCAGAGTATATGCCCATGCTCATGATTATCATATCAATTCTATTTCAAATAACAGTGATGGCGAAACTTTCATATCAGCCGATGATTTGCGTATAAATCTTTGGAATCTGGAAATTAGCAATCAAAGTTTTAATATTGTCGATGTAAAGCCTGCAAATATGGAGGATCTGACAGAGGTAATAACATCAGCAGAATTCCACCCTACACATTGTAATACATTGGCATACAGCAGTTCAAAGGGTTCAATCCGCCTAGTTGACTTGCGGCAATCAGCATTATGTGATTCGCATACCAAATTGTTTGAGGAACAGGAGGCCCCTGGGTCCAGATCATTTTTCACGGAGATTATTGCTTCTATCTCAGACATAAAATTTGGGAAGGATGGAAGATACATACTTAGCCGTGATTATATGACTCTAAAGCTATGGGACATAAATATGGATTCAGGCCCGGTTGCAACTTTCCAGGTTCACGAGTATTTAAGACCTAAGCTTTGTGATCTATATGAAAATGATTCAATTTTTGACAAGTTCGAGTGTTGTCTGAGCGGTGACGGGTTGCGTATTGCTACTGGCTCTTACAGCAACTTATTCCGTGTGTTCGGTTGTGCCCTGGGAAGTGCCGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGACGACAAGTTCCAACCTCTACACCAAGGCAAAGATCCCTCGGAAACAGTATAACAAGAGTTGTAAGACGAGGTACAGAAGCCCCAGGTGTTGACGCGAATGGGAATTCTTTTGATTTCACAACAAAGTTGCTGCACTTGGCATGGCATCCGACTGAGAATTCAATCGCTTGCGCGGCCGCAAATAGCTTGTACATGTACTATGCGTAA 1296 0.4136 MDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKFWKVQEKKIKKISEMNVDPSKAMGNGSIGSSSSSRAYLANGGAPDRSHNNLSNDYSFPPGGIPSLKLPVVVSSQETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHTKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRIATGSYSNLFRVFGCALGSAEATTLEASKNPMRRQVPTSTPRQRSLGNSITRVVRRGTEAPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01745 431 PIRSF PPA2_B55 1 431 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 1 431 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 150 177 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 10 38 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 39 67 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 263 290 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 291 316 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 400 429 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 317 343 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 178 205 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 206 234 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 235 262 IPR000009 GO:0000159|GO:0019888
Adu07g01745 431 Pfam WD domain, G-beta repeat 142 178 IPR001680 GO:0005515
Adu07g01745 431 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 23 37 IPR018067 -
Adu07g01745 431 MobiDBLite consensus disorder prediction 80 104 - -
Adu07g01745 431 Gene3D - 4 429 IPR015943 GO:0005515
Adu07g01745 431 SMART WD40_4 248 286 IPR001680 GO:0005515
Adu07g01745 431 SMART WD40_4 139 178 IPR001680 GO:0005515
Adu07g01745 431 SMART WD40_4 290 344 IPR001680 GO:0005515
Adu07g01745 431 SMART WD40_4 23 63 IPR001680 GO:0005515
Adu07g01745 431 SMART WD40_4 189 229 IPR001680 GO:0005515
Adu07g01745 431 MobiDBLite consensus disorder prediction 83 98 - -
Adu07g01745 431 SUPERFAMILY WD40 repeat-like 18 423 IPR036322 GO:0005515
Adu07g01745 431 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 148 162 IPR018067 -
Adu07g01745 431 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01745 Adu-Chr7 52592169 52599324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01745 K04354 - gmx:100799449 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00434 09 4948639 4955620 Adu07g01745 07 52592169 52599324 ECH
Adu07g01745 07 52592169 52599324 Adu07g01745 07 52592169 52599324 ECH
Adu07g01745 07 52592169 52599324 Adu09g00434 09 4948639 4955620 PCT