Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00385 ATGGGTTTCTTTAACTTGTTCCTTTTTATCATAATCTTTCATGTCTTTGTTGCAACACCCATATTCTCACATTCATCATCGTCAATCTCCACAAAATTTCTAGATTTGGCTAAGAGTCCTGAAGTATTTGATTGGATGGTTGGGATCAGAAGAAAGATTCATGAGTACCCAGAATTGTCCTATGAGGAATTTAAGACTAGTGAGGTCATAAGAGAAGAGTTGGACAAAATGGGAATTTCATATAAGCATCCAGTTGCTGAAACCGGTGTTATTGGATACATTGGAACTGGAAAACCTCCTTTTGTTGCTTTAAGAGCTGATATTGATGGTCTCCCAATCCAGGAAATGGTGGAGTGGGAACACAAGAGTAAAGTACCTGGAAAGATGCATGCTTGTGGCCATGATGCTCACACTGCTATGGTTCTTGGTGCTGCTAAGATTCTCAAACAACATGAAGATCAGATTAAAGGCACAGTTGTTCTTGTTTTTCAACCAGCAGAGGAAGGAGGAGCAGGGGCAAAGAGAATCTTAGAGGCAGGAGTACTAGACAAAGTCTCTGCCATCTTTGGATTACACGTGGCGCCGGCACATGAATTACCCGTAGGACACGTGGCATCTAAGGCTGGTCCATTAATGGCAGGAAGTGGAATGTTTGATGCAACTATACATGGAAAGGGAGGCCATGCAGCTATGCCTCACTTCGCCATTGATCCCGTTTTAGCAGCTTCTAGTGCTGTTGTCAGCTTGCAACAACTTGTTTCTCGTGAAGCCGATCCTCTTGATCCCCAGGTAGTTACGGTTACTAATTTCCATGGAGATGGTGCATTCAACGTTATTCCAGATTCTGTTACTATTGGAGGAACCTTCCGAGCTTTTTCCCCCGAAAGCATCACGCGTTTGAAGGACCGCATTCACCAGGTTATCACCGGACAAGCGGCAGTCCATAGGTGCACAGCGGAGGTCGACTTCCATGAAGATAAGAAACCGTTGTATCCGGCAACCATAAACGACGACAAGTTACATGAGCATTTTCTTGAAGTGGCCAAGAATGTTGTTGGAAGCGAGAATGTTCATGAGATGCAACCTGTGACAGTATCCGAAGACTTCTCATTCTATCAAGAAGCTTTACCTGGTTACTTCTTCATGCTTGGAATGAAAAGTCACTCCGGTGAACCACTTGCAACGTTGCACTCACCACATTTCACAGTGAATGAAGATGCTTTAGCCTATGGTGCTGCACTTCATGCTTCCTTAGCTACTACTTATCTTCTAAACCATGATGGAGCCAACAAGGTGGGAGGGAAATATCATGATGAGTTATAG 1323 0.4384 MGFFNLFLFIIIFHVFVATPIFSHSSSSISTKFLDLAKSPEVFDWMVGIRRKIHEYPELSYEEFKTSEVIREELDKMGISYKHPVAETGVIGYIGTGKPPFVALRADIDGLPIQEMVEWEHKSKVPGKMHACGHDAHTAMVLGAAKILKQHEDQIKGTVVLVFQPAEEGGAGAKRILEAGVLDKVSAIFGLHVAPAHELPVGHVASKAGPLMAGSGMFDATIHGKGGHAAMPHFAIDPVLAASSAVVSLQQLVSREADPLDPQVVTVTNFHGDGAFNVIPDSVTIGGTFRAFSPESITRLKDRIHQVITGQAAVHRCTAEVDFHEDKKPLYPATINDDKLHEHFLEVAKNVVGSENVHEMQPVTVSEDFSFYQEALPGYFFMLGMKSHSGEPLATLHSPHFTVNEDALAYGAALHASLATTYLLNHDGANKVGGKYHDEL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00385 440 Pfam Peptidase dimerisation domain 214 311 IPR011650 -
Adu09g00385 440 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 440 IPR017439 GO:0016787
Adu09g00385 440 TIGRFAM amidohydrolases: amidohydrolase 46 411 IPR017439 GO:0016787
Adu09g00385 440 CDD M20_IAA_Hyd 46 423 IPR044757 GO:0009850|GO:0016787
Adu09g00385 440 Pfam Peptidase family M20/M25/M40 103 419 IPR002933 GO:0016787
Adu09g00385 440 Gene3D - 213 331 - -
Adu09g00385 440 Gene3D Zn peptidases 46 408 - -
Adu09g00385 440 SUPERFAMILY Bacterial exopeptidase dimerisation domain 214 323 IPR036264 -
Adu09g00385 440 PIRSF Amidohydrol_AmhX 31 427 IPR017439 GO:0016787
Adu09g00385 440 PANTHER AUXIN CONJUGATE HYDROLASE 1 440 - -
Adu09g00385 440 SUPERFAMILY Zn-dependent exopeptidases 41 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00385 Adu-Chr9 4260841 4290904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00385 K21604 K14664 gmx:100794121 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02539 07 79409159 79410927 Adu09g00385 09 4260841 4290904 PCT