Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02539 ATGCTAGCTCTGTATTTTCCAGCAATTAGTTGCAGCGGGAATAAACACTTGTTAGTTTCATTGAGAGCAAGGAAAGATATTCAAGCTGAAAAGATGAAGCAGCAATCGAAGTCCGGTGGAGGGGGAGCCAGCATGCAACGCAGCGAAAGCATGAGACTACAGGAGAGGAAGGTGAAGGATCTGATGGTGGATAAGAAGAGGCTGGTGGAGGTGCCATACACGGCGTCCCTGGCTGACACCATGAACACGCTGGTGGCAAACAGGGTGTTGGCTGTGCCAGTGGCAGCTCCGCCGGGGCAGTGGATCGGCGCGGGGGGTTCCATGATCGTGGAGTCTGACAAGCAAACAGGAGTGGTGAGAAAGCACTACATCGGGATGGTGACGATGCTTGATATAGTGGCCCACATAGCCGGCGAGGACCACTTGGATTTTGGTGGCGGCGGCGTTGAGATGACAAACGATCTCCATGAAAGGATGTCTGTCTCTGTTTCTTCCATCATAGGCCACTCTTTTGAAGGGCTTAGCCTGTGGACTCTTAATCCCTACACCAGCCTATTAGATTGCATGGAAGTGTTTAGCAAAGGAGTTCATCGTGCGATGGTGCCGGTGGACAGCCAGATGGAGAGTGGATGGTCACCAGGCGGTGGCGTTGAACTGGTGGAGTCTGCTTCCGGCTACCAAATGCTGACTCAGCTGGATGTTGTTAGGTTCTTGAGAGATCACACATCTGATGAGTTACAGGCCATTCTGGCGCGCTCTGTTCAAGACTTGGGTGCCGACACGGAACAGATCTATGCCATCACTGACCGCACTATTCTCTTGGATGCCATCAAGTGCTTAAAGTCTGCCATGTTGAACGCTGTACCTATTGTTCAATCCTCTGATGACGTCATCGCTGATGATCTCAGGCAGCTCATAAATGGGAGATTTAGGAAGCTTCTTGGGACATTCTCTGCAACTGATTTAAGGGGATGCTACATAAACACGCTCAAGTCATGGTTCGGGATAAGCGCACTTGAATTCACCCAACACATTTCGGCCAGTCCTTTGTTCGCGGCACCGGAATCACCCATCTCATGGAAGGAGCTTGTGACTTGTCATCTTGAATCTCCTTTGTCGGAGGTGATTGACAAGGCGGTTACCAAGCATGTGCATCGAGTGTGGGTGGTGGATCAGCAGTGTTTGCTCGTTGGTGTTGTGTCTCTCACCGATGTAATTAGAGTTATAAGGCTTGCTCTCATCTCACCTCCCTCTTCACACCAATGA 1266 0.5071 MLALYFPAISCSGNKHLLVSLRARKDIQAEKMKQQSKSGGGGASMQRSESMRLQERKVKDLMVDKKRLVEVPYTASLADTMNTLVANRVLAVPVAAPPGQWIGAGGSMIVESDKQTGVVRKHYIGMVTMLDIVAHIAGEDHLDFGGGGVEMTNDLHERMSVSVSSIIGHSFEGLSLWTLNPYTSLLDCMEVFSKGVHRAMVPVDSQMESGWSPGGGVELVESASGYQMLTQLDVVRFLRDHTSDELQAILARSVQDLGADTEQIYAITDRTILLDAIKCLKSAMLNAVPIVQSSDDVIADDLRQLINGRFRKLLGTFSATDLRGCYINTLKSWFGISALEFTQHISASPLFAAPESPISWKELVTCHLESPLSEVIDKAVTKHVHRVWVVDQQCLLVGVVSLTDVIRVIRLALISPPSSHQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02539 421 MobiDBLite consensus disorder prediction 29 52 - -
Adu07g02539 421 Pfam CBS domain 360 409 IPR000644 -
Adu07g02539 421 Gene3D - 245 412 IPR046342 -
Adu07g02539 421 SUPERFAMILY CBS-domain pair 227 410 IPR046342 -
Adu07g02539 421 Gene3D - 42 210 IPR046342 -
Adu07g02539 421 MobiDBLite consensus disorder prediction 33 49 - -
Adu07g02539 421 SMART cbs_1 362 410 IPR000644 -
Adu07g02539 421 ProSiteProfiles CBS domain profile. 357 419 IPR000644 -
Adu07g02539 421 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-LIKE PV42A 49 416 - -
Adu07g02539 421 SUPERFAMILY CBS-domain pair 51 201 IPR046342 -
Adu07g02539 421 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 49 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02539 Adu-Chr7 79409159 79410927 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02539 - - ahf:112703780 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02539 07 79409159 79410927 Adu07g02539 07 79409159 79410927 ECH
Adu07g02539 07 79409159 79410927 Adu09g00385 09 4260841 4290904 PCT