Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00274 ATGGAAAGTAACCTACCAGTGATAGCAAAGAAAGTGTGGAACATAATACGTGTTGCCTTCTACATGTTAAGGAAGGGAATTTCAAAAGCCAAACTCATGTTAGAACTCAACATGGTTCTCAAACGCCGCCGCAAACTCGCCGGAAAAGCCATCGCCAACCTCATGATGTTCCACCACCACCAACACCCCGACATGCACCTCCAACAATTCTCCACCACCAGGGAGTACGAGTTCAGCTGCAGCAACACGCCCAATAACTTCTTCTCCAAGCTCCACCGCAAGAACAAGCTCTTCACGCGCTCCCACGCGCCTCACGAGTGCGACGACGACGTCATGACGGTTAGTGCTGTCAAGGCGGTGTTAGAGATCCTAAACAACAACAATGATAATGTGGCCGAGGCATCCCCGGCGCTACCGGGGTTCGCCCGGAGCCCTACCGTGAGTCAGTTAAGGGTAACGGATTCACCGTTTCTAATGAATGTCGACACAGAATACGATAAAGATCATCAAGTAGACAAGGCTGCGGAAGAATTCATTAAGAGGTTCTACAAAGAGTTGAGGAAGCAACCCTAA 573 0.4974 MESNLPVIAKKVWNIIRVAFYMLRKGISKAKLMLELNMVLKRRRKLAGKAIANLMMFHHHQHPDMHLQQFSTTREYEFSCSNTPNNFFSKLHRKNKLFTRSHAPHECDDDVMTVSAVKAVLEILNNNNDNVAEASPALPGFARSPTVSQLRVTDSPFLMNVDTEYDKDHQVDKAAEEFIKRFYKELRKQP 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00274 190 Pfam Cotton fibre expressed protein 169 189 IPR008480 -
Adu09g00274 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 189 - -
Adu09g00274 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00274 Adu-Chr9 2928225 2929132 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00274 - - gsj:114386903 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01870 03 32773055 32774611 Adu09g00274 09 2928225 2929132 ECH
Adu05g02485 05 89835816 89837034 Adu09g00274 09 2928225 2929132 ECH
Adu09g00274 09 2928225 2929132 Adu09g00274 09 2928225 2929132 ECH