Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01870 ATGGAAATAGAGGGAAGCCAAGCGGTGGTGGCAAACAAGGTATGGAACATAGTAAGAGTATTATTCTTCATGTTGAGAAAGGGAATAGCGAAGAGCAAACTGGTCATGGAGTTCCATTCCATTCTGAAACGAGGCAAACTGGCCGGTAAGGCTTTGCTCAACACCCTCATCTTCAACCACCATCACCACCACCTCACGTGCCGCTCACACGACACACACCTCTCCTTCATCTCTCCCCGCCTCACCACCGACTACGAGTTCAGCTGCAGCAACAGCCCCGCCGTCAAAGTCAACCGTTTACGCTCCACCATCAAACGCACCAAACACCACTCCAAATACGACGACGTTTCAACCCTCACCGCCGTTCAGAAAGTCCTTGACATGTTGAATAACACTGATCAAAACAAGGTTGACGCTTCGCCTCTCGTCACATTGCCAGGGTTCGGTAAGAGCCCTATTGGGAAACAGTTGAGGGTTACCGATTCACCCTTCCCTCTCAAGGACGAAGGTGATAACGGCCAAGTTGACATGGCTGCCGAGGAATTCATCAGGAGGTTTTACAAGGAACTCAACATGCAGAAAAAACTCGCTCTTGAGTCTCCTAATTACCATAACTACTACTCTACTTGGGACAGATAG 639 0.493 MEIEGSQAVVANKVWNIVRVLFFMLRKGIAKSKLVMEFHSILKRGKLAGKALLNTLIFNHHHHHLTCRSHDTHLSFISPRLTTDYEFSCSNSPAVKVNRLRSTIKRTKHHSKYDDVSTLTAVQKVLDMLNNTDQNKVDASPLVTLPGFGKSPIGKQLRVTDSPFPLKDEGDNGQVDMAAEEFIRRFYKELNMQKKLALESPNYHNYYSTWDR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01870 212 Pfam Cotton fibre expressed protein 173 195 IPR008480 -
Adu03g01870 212 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 3 204 - -
Adu03g01870 212 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 3 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01870 Adu-Chr3 32773055 32774611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01870 - - jre:108982393 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01870 03 32773055 32774611 Adu09g00274 09 2928225 2929132 ECH
Adu03g01870 03 32773055 32774611 Adu03g01870 03 32773055 32774611 ECH
Adu03g01870 03 32773055 32774611 Adu05g02485 05 89835816 89837034 PCT