Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00138 ATGCAGCATAACATGCTTATGACAGCTACAAAGGCAAAAGATTGTACTACTTCTACATTACTTGAGCTTTTCACTGAGATGAAGAATCAAACCAACACAGATTCCATCAATTTTCCACCACCAAGATCTCCATCATCCCAATTCTCCTCTGAATGCTGGTTTGATGATGCATGCATCCTTGACATGGACTACTTTGTCAAGACCCTTTCCGGAATCAAAGCGAAAGGCGTCCGGGCCGACTTGATTGGTTCCATAATCACACACTATGCCTCCAAATGGCTACCTGACCTCTCTGCAGGTGACTTGGCCGAAAAAGGCCTTACGCAATTCGAGGAATCACCAGAGAGCGTCACAGCTTCTTGGATGAAGAAGAGGTTCTTTGTGGAAACATTGGTGGGAGTTCTGCCTCCTGAGAAGGATGCAATCCCCTGCAACTTCCTCCTTCGCCTTCTCCGAACAGCGAACATGGTTGGTGTTGAGGCTAGTTATAGACACGAGCTTGAGAGGCGGATTTCATGGCAGCTTGACCAAGCTTCATTGAGAGAGCTTGTGATTCCATCATTCAGCCACACTTGTGGAACTCTTTTGGATGTTGAACTTGTTATTAGGCTTGTTAAGAGGTTTGTGGGTTTGGATAGTGAGGGAGCCAAGAGTGGTGCTGCTCTTGTTAAGGTGGCTAAGTTGGTTGACTGCTACCTCGCCGAGGCTGCTGTCGATGCGAATTTGAGCTTGTCCGAGTTTGTCACTCTTGCAGGAGCTCTTCCAAGCCATGCTAGAGCAACAGATGATGGATTGTACAGAGCCATTGACACTTATCTTAAAGCACATCCAAGTGTGTCCAAGGAAGATAGGAAGGGTTTGTGTAGGCTTATTGATAGCCGGAAACTCACTCCGGAGGCGTCGCTTCACGCGGCTCAAAATGAAAGGTTCCCTGTGAGAGCTGTGATTCAGGTGCTCCTGTCAGAGCAAACTAAATTGAACCGGAATCTAGATTGGAGTGGCTCCTTGATCAGCAGCACTAGGAGCCCGAATGGCGTGCTAGACGCATGTCTTTCGAAGCGCGAGATGAATGCTCAACACATGGAGATAAGGAAGCTCAAGGAAGAGCTGTATAGGGTGCAAAGCCAGTGCAATGCAATGCAGGTACAAATGGAGAGGATGGTTGAAAAGAAGAAAGGGTTCTTCAAGTGGATGAGATTTGGGGTGATGCCTAATGCATTTGGAAGCAAAGGGTTTGGAGGAGTGGAGAAAATTGATGAAGTTGTTGAAGGAGAAGTTGGATTTGGAAGGCAAACACCAATGGACTTGAAGACCAAGTTGGTCAAAGGTAGGACTCCTCACAAGTGGAGGAAATCCTTGTCTTGA 1365 0.4703 MQHNMLMTATKAKDCTTSTLLELFTEMKNQTNTDSINFPPPRSPSSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSAGDLAEKGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLLRLLRTANMVGVEASYRHELERRISWQLDQASLRELVIPSFSHTCGTLLDVELVIRLVKRFVGLDSEGAKSGAALVKVAKLVDCYLAEAAVDANLSLSEFVTLAGALPSHARATDDGLYRAIDTYLKAHPSVSKEDRKGLCRLIDSRKLTPEASLHAAQNERFPVRAVIQVLLSEQTKLNRNLDWSGSLISSTRSPNGVLDACLSKREMNAQHMEIRKLKEELYRVQSQCNAMQVQMERMVEKKKGFFKWMRFGVMPNAFGSKGFGGVEKIDEVVEGEVGFGRQTPMDLKTKLVKGRTPHKWRKSLS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00138 454 ProSiteProfiles NPH3 domain profile. 51 325 IPR027356 -
Adu09g00138 454 Coils Coil 363 383 - -
Adu09g00138 454 Pfam NPH3 family 52 301 IPR027356 -
Adu09g00138 454 PANTHER OS12G0117600 PROTEIN 3 454 IPR043454 -
Adu09g00138 454 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 3 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00138 Adu-Chr9 1343464 1346385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00138 50 346 EF-hand Containing Proteins AT3G44820 34.985 7.11e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00138 - - gmx:100777676 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00138 09 1343464 1346385 Adu09g00138 09 1343464 1346385 ECH
Adu07g02495 07 79158391 79161105 Adu09g00138 09 1343464 1346385 PCT