Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02495 ATGGACTATAATAACTATAAGGTTTCTTCAACCACTGAGACAAAAACCAGAGCCAACAAGTTCCTTAACACTGCAGTAATGATGAACAATGACAACCATTCCTGCCACCAACATCATGAAGAAGAAGAAGAAGAAGAAACGCATTGCTGGTTTGATGATGCATGCATTCTGGACATGGACTACTTCGTGAAGACCCTCTCAGGAATCAAGCAAAAGGGTGTTCGTTCTGATTTGATAGGATCAATCATAACTCATTATGCTTCCAAATGGCTCCCTGACCTTTCTTCTTCAACTGACATCTTTTCTGATAACAAGGATCGTCTTACATCACCAGAGAGTGTCACAGCTTCATGGCTAAAGAAGAGGTTCTTTGTTGAAACCTTGGTTGGTGTTCTTCCACCAGAGAAAGATTCCATCCCATGCAACTTCCTCCTTAGGCTCCTAAGAACAGCTAACATGGTTGGGGTTGAGGGAAGTTACAGATTAGAGCTTGAGAAGCGGATTTCATGGCAGCTAGACCAGGCTTCATTGAAGGAGCTTATGATACCTTCGTTTAGCCACACTTGTGGGACACTGCTTGATGTTGAGATTGTGATAAGGTTGGTGAAGAGGTTTGTGTGCTTGGACCATGAAGGTGTTAAGAGTGGTGCTGCTTTGATTAAGGTGGCTAAGCTGATTGATTCCTACCTTGCTGAGGTTGCTTTAGATGCTAATCTCACCTTGTCTGAGTTTGTTTCACTCGCTGGAGCTCTTCCAACTCATGCAAGAGCCACTGATGATGGCTTGTACAGAGCCATTGATACTTATCTCAAAGCACATCCAAGTGTGTCAAAGCAAGAAAGGAAGGGTCTGTGTAGGCTTATTGATAGCAGAAAACTCACACCAGAGGCCTCACTTCATGCAGCTCAAAATGAACGGTTACCTGTGAGAGCTGTTATTCAAGTTCTCTTCTCTGAACAAACTAAGCTAAACCGCCATTTGGACTGGAGTAGTGGCTCCTTCAGTGGCCTCAGGAGCCCCTGCAATGGCAGCTTAGACACGCCTTTACGGTGCCTGTCAAAGCGCGAAATGAGTGCTCAGCAGATGGAGATAAGGAAGCTGAAAGAAGAGGTTTATAGGCTGCAAAACCAGTGCAATGCAATGCAAGTGCAGCTGGAGAGAATGGTGGAGAAGAAGAAAGGTTTGTTCTTCAAGTTGAAGAAGTTTGGTATTGGTAATAGAAGCAGCAGCATTGTGGGAGAGGTAGAGAAGATTATGGAACAAGAGAGTGGCAGGTTTGGAAGGGAAACGCCAATGGACTTAAAAAGTGGTGTGTTAGGTGTTATGACTCCTCACAAGTGGAGGAAATCTACCTCCTGA 1359 0.4444 MDYNNYKVSSTTETKTRANKFLNTAVMMNNDNHSCHQHHEEEEEEETHCWFDDACILDMDYFVKTLSGIKQKGVRSDLIGSIITHYASKWLPDLSSSTDIFSDNKDRLTSPESVTASWLKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEGSYRLELEKRISWQLDQASLKELMIPSFSHTCGTLLDVEIVIRLVKRFVCLDHEGVKSGAALIKVAKLIDSYLAEVALDANLTLSEFVSLAGALPTHARATDDGLYRAIDTYLKAHPSVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHLDWSSGSFSGLRSPCNGSLDTPLRCLSKREMSAQQMEIRKLKEEVYRLQNQCNAMQVQLERMVEKKKGLFFKLKKFGIGNRSSSIVGEVEKIMEQESGRFGRETPMDLKSGVLGVMTPHKWRKSTS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02495 452 Coils Coil 357 384 - -
Adu07g02495 452 ProSiteProfiles NPH3 domain profile. 48 322 IPR027356 -
Adu07g02495 452 PANTHER OS12G0117600 PROTEIN 46 452 IPR043454 -
Adu07g02495 452 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 46 452 - -
Adu07g02495 452 Pfam NPH3 family 49 298 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02495 Adu-Chr7 79158391 79161105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02495 50 327 EF-hand Containing Proteins AT3G44820 38.033 2.01e-54 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02495 - - gmx:100777820 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02495 07 79158391 79161105 Adu07g02495 07 79158391 79161105 ECH
Adu07g02495 07 79158391 79161105 Adu09g00138 09 1343464 1346385 PCT