Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00124 ATGGAGGCCTTACAGTTGCAGAGTTTGTTTCCCAGAACATTATCCACACTTTCATCATCTCCAAGAGCAAGAACATCATCATCATCATCATCATTGCAACTCAACATCTTCATTAGCAACCATAAAGCATTGAGCTTGACCTCATCATCTTCTTGTTCTTCACCCGTGGCTGTTAGAGCAGGATGGTTCTCGGGCCTCACAGACAGCAAGAACAAGAAGATGGGTTTGCCTGAGACAGTGAAAGCAGGTGACCCAGTTCTGCATGAGCCTGCAGAGGATGTGGATCCCAATGAGGTTAGGTCTGAGAGGATTCAGAAGATCATTGATGACATGATCAGGGTCATGAGAAAAGCTCCTGGTGTTGGCCTTGCTGCTCCCCAGATTGGTGTTCCATTAAGGATAATTGTTTTGGAAGATACCACAGAATATATTGGTTATGCACCAAAGGAAGAGGTCAAAGCTCAAGATAGAAGACCTTTTGATCTTTTGGTGATCCTGAATCCCACACTCCTGAAAAAGAGCAACAAGACTGCCCTATTTTTTGAAGGATGCCTAAGTGTTGATGGATTCAGAGCATTGGTGGAGCGACATCTTGACGTCGAGGTCACCGGTTTGGATCGTTATGGCGAACCAATCAAAGTAACAGCTACCGGTTGGCAGGCGCGGATTTTACAACACGAGTGTGATCACTTGGAAGGAACTCTTTATGTTGACAAGATGGTGCCTAAAACTTTCAGAACAGTAGAAAACCTGACCCTGCCTCTTGCTAAGGGGTGCCCCAAACTCGGCTCTCGCTAG 798 0.4586 MEALQLQSLFPRTLSTLSSSPRARTSSSSSSLQLNIFISNHKALSLTSSSSCSSPVAVRAGWFSGLTDSKNKKMGLPETVKAGDPVLHEPAEDVDPNEVRSERIQKIIDDMIRVMRKAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEEVKAQDRRPFDLLVILNPTLLKKSNKTALFFEGCLSVDGFRALVERHLDVEVTGLDRYGEPIKVTATGWQARILQHECDHLEGTLYVDKMVPKTFRTVENLTLPLAKGCPKLGSR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00124 265 CDD Pep_deformylase 80 236 IPR023635 GO:0042586
Adu09g00124 265 Gene3D Peptide deformylase 76 265 IPR036821 -
Adu09g00124 265 Pfam Polypeptide deformylase 80 243 IPR023635 GO:0042586
Adu09g00124 265 TIGRFAM pept_deformyl: peptide deformylase 80 243 IPR023635 GO:0042586
Adu09g00124 265 SUPERFAMILY Peptide deformylase 74 248 IPR036821 -
Adu09g00124 265 PRINTS Peptide deformylase signature 109 138 IPR023635 GO:0042586
Adu09g00124 265 PRINTS Peptide deformylase signature 182 193 IPR023635 GO:0042586
Adu09g00124 265 PRINTS Peptide deformylase signature 194 212 IPR023635 GO:0042586
Adu09g00124 265 PRINTS Peptide deformylase signature 213 242 IPR023635 GO:0042586
Adu09g00124 265 Hamap Peptide deformylase [def]. 75 251 IPR023635 GO:0042586
Adu09g00124 265 PANTHER PEPTIDE DEFORMYLASE 32 264 - -
Adu09g00124 265 PANTHER PEPTIDE DEFORMYLASE 32 264 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00124 Adu-Chr9 1214115 1217130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00124 K01462 - gmx:100784292 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00124 09 1214115 1217130 Adu09g00124 09 1214115 1217130 ECH
Adu07g02513 07 79283824 79285628 Adu09g00124 09 1214115 1217130 PCT