Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02513 ATGGGGGCGGTGGTGCAGCGGTTGTGGTTGCTCCGTTCGCATACAGCTCCCATATCACTACTAAGGAGCTCAGATACGACGTCGTTGGCGAGATGTTTGAGCTCCAAAGCAGGGTCAGGGTGGTTTCGCGGGCTCGAAGGGAACAAGAAGTCGAAACTGCCCTCTATTGTGAAAGCTGGAGAACCGGTACTGCACGAGCGTGCAATGGAAGTGAATGTGAAGGAGATAAAGTCAGAAAGAGTGCAGAGTATTATCGATGACATGATCAAGGTCATGAGGAAAGCCCCTGGTGTTGGCCTGGCTGCTCCTCAGATTGGAATCCCCTTTAGGATAATTGTTTTGGAAGATAAAGAGGAATATATTGGTCTTGACACTAAGGAAGAGGCTGAAGCTCAAGATAGAAGACCTTTTGATCTCTTGGTTATCTTGAATCCTAAGCTAAAGAACAAGACCAACAGGACAGCCCTTTTCTTTGAAGGCTGCTTGAGTGTTAATGGATTTCTAGGTGTTGTGGAGCGTTACCTCGATGTTGAGGTATCGGGTTATGATCGTCATGGTGAGCCTATCAAAATAAATGCTACAGGTTGGCAGGCTCGGATTTTACAGCACGAGTGCGATCATCTGGATGGAACTCTCTATGTTGATAAGATGCTACCTAAAACTTTCAGAACTGCCGAAAACCTGGACTTGCCTCTTGCCTGTGCCTGCCCAAAACTTGGTTCCCGCTAA 729 0.4733 MGAVVQRLWLLRSHTAPISLLRSSDTTSLARCLSSKAGSGWFRGLEGNKKSKLPSIVKAGEPVLHERAMEVNVKEIKSERVQSIIDDMIKVMRKAPGVGLAAPQIGIPFRIIVLEDKEEYIGLDTKEEAEAQDRRPFDLLVILNPKLKNKTNRTALFFEGCLSVNGFLGVVERYLDVEVSGYDRHGEPIKINATGWQARILQHECDHLDGTLYVDKMLPKTFRTAENLDLPLACACPKLGSR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02513 242 PANTHER PEPTIDE DEFORMYLASE 33 242 IPR023635 GO:0042586
Adu07g02513 242 PANTHER PEPTIDE DEFORMYLASE 33 242 - -
Adu07g02513 242 CDD Pep_deformylase 56 213 IPR023635 GO:0042586
Adu07g02513 242 Hamap Peptide deformylase [def]. 52 228 IPR023635 GO:0042586
Adu07g02513 242 PRINTS Peptide deformylase signature 86 115 IPR023635 GO:0042586
Adu07g02513 242 PRINTS Peptide deformylase signature 159 170 IPR023635 GO:0042586
Adu07g02513 242 PRINTS Peptide deformylase signature 171 189 IPR023635 GO:0042586
Adu07g02513 242 PRINTS Peptide deformylase signature 190 219 IPR023635 GO:0042586
Adu07g02513 242 Pfam Polypeptide deformylase 55 219 IPR023635 GO:0042586
Adu07g02513 242 Gene3D Peptide deformylase 52 241 IPR036821 -
Adu07g02513 242 SUPERFAMILY Peptide deformylase 53 224 IPR036821 -
Adu07g02513 242 TIGRFAM pept_deformyl: peptide deformylase 56 220 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02513 Adu-Chr7 79283824 79285628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02513 K01462 - pvy:116144913 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02513 07 79283824 79285628 Adu07g02513 07 79283824 79285628 ECH
Adu07g02513 07 79283824 79285628 Adu09g00124 09 1214115 1217130 PCT