Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02657 ATGGCAGAGGAAGCTCCAAAGACATCACCATCACCACCACAAGAGGAAGCAGTGTTGCATGTGGAACAAGTTAGGGTCACTGACGTTGACGAGAAAGAACACTCCACCACCGCCATTGTTGAGAATGAGAAGGAGACAGAGAAAGAGCATGTTGTTGAAGATGAAAAGAAAGAAGAAGAAGCTTCTGTAGCTGCAAATGAAAATAATGCCGGCGAGGATTCAAAAGCATGTGATGATGAGAAGGTTCCAGAATCAGGTTCGTTCAAGGAAGAGAGCACGAAGGTTTCTGAACTTGCTGAGACTGAGAAGAAGGCACTTCAAGAGCTCAAAACCCTAATCCAAACTGCACTCAACAATCGTGAATTCTCTGCACCAAAAGAAGAAAAGCCTGCAGTTGAATCTGATGTAGCAGAAGAAAAGAAGAAGGAAGAAGAAGAAAAAGAAGCAGAGAAAAACCACCTAATTGAGGAGAAAAAGGATTCATCAGAAGAAAAAGAAGCTGCAGCAGAAGTGAAAGAAGCAACAACAACAGCAGAAGCTTTATCTTCTTCTGTGGATGACGACGAAGCAAAAACCGTTGAGGCCATTGAAGAAACCGTGGTGGCAGTTTCTTCCACAACTGAAGCTGAAGAACTAGCTCCAAAGAAGGAAGAAGAGTGTTCGCCATTGTTGGCGCCAGAAGAAGTCTCAATCTGGGGAGTGCCGCTCCTCGCCGACGAAAGAACAGACGTGATCCTCTTGAAGTTCCTTCGCGCACGTGATTTCAGGGTAAAAGAAGCGTTCACCATGATCAAGAACACGATCAAGTGGCGAAAGGAGTTCAAGATCGACGAATTACTGGAACAAGAAGAAGAAGATAATATTTTCATTAATACAATGGATTTTGAAAAGGCGGTATACATGCACGGATACGACAAAGAAGGGCACCCCGTGTGTTACAACATCTATGGCGAGTTCCAGAACAAGGAGCTGTATAAGAAGGCATTCTCGGATGAGGAGAAGAGGGAGAGGTTCTTGAAATGGAGGATTAGGTTACTTGAGAGGAGTATTAGGAAGCTTGATTTCTGGCCTGGTGGGATATCCACCATTGTTCAGGTTAATGATCTCAAGAATTCACCTGGTCCTGCTAAGTGGGAACTTAGACAAGCAACCAAACAGGCCGTTCAATTGCTTCAAGATAATTACCCTGAATTTGTTGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACTTGGCAGTGAACAGGATGATAAGTCCATTTCTGACACAGAGAACGAAGAGCAAGTTTGTGTTTGCTGGTCCTTCCAAAACAGCCGAGACCCTCTTAAGGTACATTGCAGCTGAGCAACTTTCTGTGAAGTATGGAGGACTAAGTAAAGATGGGGAATTCGGAAATAACGATGCTGTTACCGAGATAACTGTGAGACCAGCTGCTAAACATTCTGTGGAGTTTCCAGTTACTGAGAATTGTGTATTGTCTTGGGAGATGAGAGTAATAGGGTGGGATATAAGTTATGGTGCTGAATTTGTGCCAAACTCAGAAGGAAGCTACACAGTAATAATTCAAAAAGCTAGAAAGGTTGCACCATCAGAAGAACCTGTTCTTTGCAACAGTTTCAAGATTGGTGAACCTGGCAAAGTGGTTCTCACCATTGAAAATCAAAGCTCCAAGAAGAAGAAGCTCTTGTACCGCTTGAAGACCAAACCCGAGTGA 1716 0.4371 MAEEAPKTSPSPPQEEAVLHVEQVRVTDVDEKEHSTTAIVENEKETEKEHVVEDEKKEEEASVAANENNAGEDSKACDDEKVPESGSFKEESTKVSELAETEKKALQELKTLIQTALNNREFSAPKEEKPAVESDVAEEKKKEEEEKEAEKNHLIEEKKDSSEEKEAAAEVKEATTTAEALSSSVDDDEAKTVEAIEETVVAVSSTTEAEELAPKKEEECSPLLAPEEVSIWGVPLLADERTDVILLKFLRARDFRVKEAFTMIKNTIKWRKEFKIDELLEQEEEDNIFINTMDFEKAVYMHGYDKEGHPVCYNIYGEFQNKELYKKAFSDEEKRERFLKWRIRLLERSIRKLDFWPGGISTIVQVNDLKNSPGPAKWELRQATKQAVQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKTAETLLRYIAAEQLSVKYGGLSKDGEFGNNDAVTEITVRPAAKHSVEFPVTENCVLSWEMRVIGWDISYGAEFVPNSEGSYTVIIQKARKVAPSEEPVLCNSFKIGEPGKVVLTIENQSSKKKKLLYRLKTKPE 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02657 571 Gene3D - 208 273 - -
Adu08g02657 571 SMART sec14_4 292 460 IPR001251 -
Adu08g02657 571 Gene3D GOLD domain 473 568 - -
Adu08g02657 571 MobiDBLite consensus disorder prediction 26 63 - -
Adu08g02657 571 Pfam CRAL/TRIO, N-terminal domain 219 266 IPR011074 -
Adu08g02657 571 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 468 566 IPR036598 -
Adu08g02657 571 ProSiteProfiles GOLD domain profile. 467 568 IPR009038 -
Adu08g02657 571 PANTHER PATELLIN-1 1 570 IPR044834 GO:0008289
Adu08g02657 571 MobiDBLite consensus disorder prediction 122 172 - -
Adu08g02657 571 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 301 463 IPR001251 -
Adu08g02657 571 Coils Coil 99 119 - -
Adu08g02657 571 CDD SEC14 294 458 IPR001251 -
Adu08g02657 571 SMART CRAL_TRIO_N_2 242 267 IPR011074 -
Adu08g02657 571 MobiDBLite consensus disorder prediction 116 190 - -
Adu08g02657 571 MobiDBLite consensus disorder prediction 72 99 - -
Adu08g02657 571 Pfam CRAL/TRIO domain 297 457 IPR001251 -
Adu08g02657 571 Gene3D - 286 472 IPR036865 -
Adu08g02657 571 PANTHER PATELLIN-3 PROTEIN 1 570 - -
Adu08g02657 571 Coils Coil 132 164 - -
Adu08g02657 571 SUPERFAMILY CRAL/TRIO domain 298 460 IPR036865 -
Adu08g02657 571 MobiDBLite consensus disorder prediction 26 99 - -
Adu08g02657 571 SUPERFAMILY CRAL/TRIO N-terminal domain 95 282 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02657 Adu-Chr8 42682468 42686066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02657 246 437 Acyl Lipid Metabolism Gene Families AT5G47730 28.571 9.19e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02657 - - gmx:100805585 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02657 08 42682468 42686066 Adu08g02657 08 42682468 42686066 ECH
Adu03g02956 03 111609821 111613077 Adu08g02657 08 42682468 42686066 PCT