Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02956 ATGATGGCCGAGGAAGCTCCAAAGAACCAAGAGGCGGTGGTGGTTACACATGTTCCGCCGCCTGAGGCCGAGGAAGAGAAGAAGCAGCCCGTGACTTTGGGCACTCACCTCTCCAAGCTTCCGGAATCCGGAACCTTCAAGGAAGAAAGCACCAAGCTTTCTGATCTCCCTGAGACCCACAACAAGGCGCTACAAGAACTCAAGAGCCTCGTTCAGGAAGCTCTTAATAACCACCAATTCTCTGTCCCTAACCAACCCAAGCAACAACACAAGCCTGAAGAAGCTGTAACTGCTGAGAAAGAAAGTGAAACGAAAGAGGAAGAAAAAGCTTCTGAACCTGCCACGAAAACAGACAACGAGGACGAGGTGGGAGAAGAAGTGAAAGAAACCGCAGTGGTTGAGGTTGAAGAAAAGGTGGTGGCTGCTCCATCCATTGATGATGATGGTGCAAAAACTGTTGAGGCTATTGAAGAGACCGTTGTTGCTGTCTCTGTTTCAACAACAGAAAGTCCACATCCACCGGCACAGAAAGTTTGCCAAGAAGCCAAGGAGGACGTGCCATTGCCACCGGAAGAGGTATCCATTTGGGGGATACCACTTCTTGCAGACGAAAGAAGCGACGTCATCCTCTTGAAGTTCCTGCGCGCCAGAGACTTCAAAGTGAAAGACGCTTTCGCCATGATGAAGAATACAATCCGGTGGAGGAAAGAGTTCGGAATCGATGAGCTAATGGAGGAGAATTTAGATTGTGATGAACTGGAGAAGGTGGTGTTCATGCATGGATTCGACAAAGAAGGACACCCTGTTTGTTACAACATATTCGGCGAGTTCGAGAACAAGGAGCTGTATAAGAAGACATTCTCTGATGAGGAGAAGAGGCAGAGGTTCCTGAGATGGAGGATTCAGTTCTTGGAGAAGAGTATTAGGAAACTGGACTTCAATCCTGGCGCCATTTCCACCATTGTTCAGGTCAATGATCTCAAGAACTCGCCTGGTCTTGCCAAGTGGGAGCTTAGACAAGCTACCAAAGAAGCCCTTCAGCTACTTCAGGACAATTACCCTGAATTTGTGGCCAAACAGGTTCATCTTTTTTGTTATTCTCAATTGCATGCAAATCACTAG 1122 0.4777 MMAEEAPKNQEAVVVTHVPPPEAEEEKKQPVTLGTHLSKLPESGTFKEESTKLSDLPETHNKALQELKSLVQEALNNHQFSVPNQPKQQHKPEEAVTAEKESETKEEEKASEPATKTDNEDEVGEEVKETAVVEVEEKVVAAPSIDDDGAKTVEAIEETVVAVSVSTTESPHPPAQKVCQEAKEDVPLPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFAMMKNTIRWRKEFGIDELMEENLDCDELEKVVFMHGFDKEGHPVCYNIFGEFENKELYKKTFSDEEKRQRFLRWRIQFLEKSIRKLDFNPGAISTIVQVNDLKNSPGLAKWELRQATKEALQLLQDNYPEFVAKQVHLFCYSQLHANH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02956 373 SMART CRAL_TRIO_N_2 206 231 IPR011074 -
Adu03g02956 373 MobiDBLite consensus disorder prediction 92 125 - -
Adu03g02956 373 MobiDBLite consensus disorder prediction 74 91 - -
Adu03g02956 373 PANTHER PATELLIN-1 8 363 IPR044834 GO:0008289
Adu03g02956 373 MobiDBLite consensus disorder prediction 42 60 - -
Adu03g02956 373 SUPERFAMILY CRAL/TRIO domain 256 359 IPR036865 -
Adu03g02956 373 MobiDBLite consensus disorder prediction 1 60 - -
Adu03g02956 373 SUPERFAMILY CRAL/TRIO N-terminal domain 51 247 IPR036273 -
Adu03g02956 373 Pfam CRAL/TRIO domain 255 359 IPR001251 -
Adu03g02956 373 Gene3D - 176 365 IPR036865 -
Adu03g02956 373 PANTHER PATELLIN-3 PROTEIN 8 363 - -
Adu03g02956 373 Pfam CRAL/TRIO, N-terminal domain 191 230 IPR011074 -
Adu03g02956 373 CDD SEC14 252 359 IPR001251 -
Adu03g02956 373 MobiDBLite consensus disorder prediction 74 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02956 Adu-Chr3 111609821 111613077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02956 - - gmx:100804544 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02956 03 111609821 111613077 Adu03g02956 03 111609821 111613077 ECH
Adu03g02956 03 111609821 111613077 Adu08g02657 08 42682468 42686066 PCT