Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02569 ATGTCTACGTTTTCTACTCTGAGGAGGCCCTCACTGTTAATAACCCAACGCCTGCACCACTCTTCACAAACATGCACACCAATAATCCAACCCAATAATAATAATAATCAAAAGAAGAAGCTGGGTTGTTTGGGGATTGTGGTTGGAATTTTTGTGTGTTGTTCTTGTTCCTTCTTCATTCCCATCACTACCAACAACTCCAACTCCCCTTCATCTAGTCATGATGATGATGCAAACACTTCAACTTTTTCTTCACATTCTTTGTTTAGAAAACTCTCCCTTCCACAGAACAAACACAGCTTGCTCTTTGGAGATTTGTACAGGAGGAAAGTTTTCTTCAACTATGAGAAGCGCATGCGTTTGCATAGTCCTCCCGAGAAGGTATTTGAATACTTTGCATCATGCCGGAGTCCGGAAGGAGAGGTGCTGATGGAGGCAGCAGACCTAATGAGAGCTGTGGTTCCGGTGTTCCCGCCATCGGAATCGAATCTTGTGAGGGAAGGATACTTGAAAGGTGAAAGAAGAAGTCCAGGCCATCTTCGTTGTTCCCCTTCTCTGTTTTTCATGCTCTTTGATGTCAACAATGATGGCCTTATATCTTTCAACGAGTATATCTTTTTGGTAACACTACTTAGCATACCAGAATCAAGTTTTTCTGCGGCATTTAAAATGTTTGACATGGATAATGACGGGGAGATTGATAAGGAAGAATTCAAGAAAGTGATGGCATTGATGCGATCTCATAATAATTATAGACAAGGTGCTCATCACCATAGGGATGGAATGAGAAAAGGCTCAAAGGTCAATGATGATTATGTAGAAAATGGAGGTGTTTTGGAATATTTTTTTGGCATAGATGGAAAGGGACGCCTTAGCATTCATAGATTCTTGCAATTTATGAGAGACTTGCATCATGAAATACTAAGGCTGGAGTTTGATCATTATGACTACAAATCAAGAAAAACCATATCTGCCAAGGACTTTGCTCTCTCAATAGTAGCATCTGCTGATCTGAGTCATCTGGGTAGGTTGCTAGATTTGGTTGAAGAAATGAACAATGATCCAAGCTTTAAGGATGTACACATCACATTTGAAGAGTTCAACAATTTTGCAGAGCTAAGGAAAACATTGCTTCCATTTTCATTGGCCATTATTGGTTTTGCAAAAGTGAATGGCTTGTTAAGAAGAGAAGATTTTCAGCGAGCTGCATCACATGTTTGTGGATTATCACTTTCTGATAACGTGGTTAAGATTGTTTACCATTTGTTTGACACAAATGGGGATGGACACTTAAGTTCAGATGAGTTTGTAAGAGTGCTACACAACAAAGAAAATGATATCACTCAACCTATGGAGACAGGGATCTTGCGTTTCTTGTCTTGCTGTTGGAACTGTAAGCATAGCTTCCCATACTCGCGGTTGTTTTCTTAG 1431 0.4004 MSTFSTLRRPSLLITQRLHHSSQTCTPIIQPNNNNNQKKKLGCLGIVVGIFVCCSCSFFIPITTNNSNSPSSSHDDDANTSTFSSHSLFRKLSLPQNKHSLLFGDLYRRKVFFNYEKRMRLHSPPEKVFEYFASCRSPEGEVLMEAADLMRAVVPVFPPSESNLVREGYLKGERRSPGHLRCSPSLFFMLFDVNNDGLISFNEYIFLVTLLSIPESSFSAAFKMFDMDNDGEIDKEEFKKVMALMRSHNNYRQGAHHHRDGMRKGSKVNDDYVENGGVLEYFFGIDGKGRLSIHRFLQFMRDLHHEILRLEFDHYDYKSRKTISAKDFALSIVASADLSHLGRLLDLVEEMNNDPSFKDVHITFEEFNNFAELRKTLLPFSLAIIGFAKVNGLLRREDFQRAASHVCGLSLSDNVVKIVYHLFDTNGDGHLSSDEFVRVLHNKENDITQPMETGILRFLSCCWNCKHSFPYSRLFS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02569 476 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Adu08g02569 476 Pfam EF hand 219 244 IPR002048 GO:0005509
Adu08g02569 476 SUPERFAMILY EF-hand 187 301 IPR011992 -
Adu08g02569 476 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Adu08g02569 476 ProSitePatterns EF-hand calcium-binding domain. 226 238 IPR018247 -
Adu08g02569 476 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 15 475 IPR039800 GO:0005509|GO:0006851
Adu08g02569 476 CDD EFh_MICU 218 442 - -
Adu08g02569 476 Gene3D - 158 250 - -
Adu08g02569 476 Gene3D - 282 378 - -
Adu08g02569 476 SMART efh_1 415 443 IPR002048 GO:0005509
Adu08g02569 476 SMART efh_1 183 211 IPR002048 GO:0005509
Adu08g02569 476 SMART efh_1 217 245 IPR002048 GO:0005509
Adu08g02569 476 PANTHER CALCIUM UPTAKE PROTEIN, MITOCHONDRIAL 15 475 - -
Adu08g02569 476 CDD EFh 188 243 IPR002048 GO:0005509
Adu08g02569 476 SUPERFAMILY EF-hand 278 442 IPR011992 -
Adu08g02569 476 Pfam EF-hand domain pair 396 440 IPR002048 GO:0005509
Adu08g02569 476 Pfam EF-hand domain pair 188 209 IPR002048 GO:0005509
Adu08g02569 476 ProSiteProfiles EF-hand calcium-binding domain profile. 213 248 IPR002048 GO:0005509
Adu08g02569 476 Gene3D - 389 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02569 Adu-Chr8 41739876 41744710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02569 87 408 EF-hand Containing Proteins AT4G32060 65.217 2.76e-143 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02569 K22827 - gmx:100786375 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02569 08 41739876 41744710 Adu08g02569 08 41739876 41744710 ECH
Adu06g02859 06 105888828 105892711 Adu08g02569 08 41739876 41744710 PCT