Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02859 ATGTCGTCCTTCTTCACTCTGAGAAAATCCTCACCGTTAATCTACCGTTTCCCAATCCAACGGTCCTTCAAGATCCGCAACTCTTCAACAACCTCACCATCTTCCTCCTCCTCCTCCCCTTCGGCACCGTCTCTCCTGAATCGTAGTAGCAGTAGCACCAACCCGCACTACACTCCTCCGCGGGGCTCCGGTCTCGGTCCTAATTGGGCTTGGGCCCTTGCCGCGGGCTCAGGCCTTGGGGTTCTCCTGCATTACCTCGCTAAGCCCAATTCCCAATTCGACTCTCCGTTCTTATCGAAATTACTGCCTTCTGTTGACTCGTGGTCAACTCCTCCTGGCAACGAAGTTGAGTCTGACCGTCGTTCCACACCGTCGTTGTTTAGAAAACTGTCCCTTCCAGAAAGTTCTAGTTTCTTCCTTATTGGAGATGCGTACAGAAGAAAGGTGTTTTTCAACTATGAGAAGCGGATACGGTTGCGAAGCCCACCCGAAAAGGTTTTTGAATACTTTGCTTCTTATCGTACCCCAGAAGGAGAACTACTTATGAAACCAGCAGATCTAATGCGAGCAGTGGTTCCTGTTTTCCCCCCATCTGAATCCCATCTTGTAAGAGATGGGTACCTGAAAGGAGAAAGAAGTCCTGGTCATTTACGGTGTGCTCCTTCGGAATTTTTTATGCTTTTTGATGTAAATGGTGATGGCCTTATATCTTTCAAAGAGTATATCTTTTTTGTAACACTACTCAGCATTCCAGAGTCAAGCTTTTCTATAGCATTTAAAATGTTTGATGTGGACAATAATGGGGAGATAAACAAGGAAGAATTCAAAAAAGTGATGGCATTGATGCGATCTCATCATCGACAAGGTGTTCAGCACAGAGATGGATTGCGAATTGGCCTAAAGGTGATTGATTCTGTGGAAAATGGAGGGATGTTGGAGTATTTCTTTGGTAAAGATGGAAATGAATGTCTCCAGCATGACAAATTCGTACAGTTTTTGAGAGATTTACATGAGGAAATTGTGAGGCTGGAGTTTTCTCATTATGACTACAAATCTCAAAAAACCATATCAGCCAAGGATTTTGGACTCTCCATGGTTGCTTCTGCTGACATAGGTCATCTAGACAAGTTGCTTGACCGGGTTGATCAGTTGGACAATGATCAACGTCTCAAGAATGTACGCATCACATTTGAAGAGTTTAAAAACTTTGCAGAGCTACGCAAAAAATTGTTACCATTTTCATTGGCGCTTTTCAGTTGTGGAAAAGTAAATGGTCTATTAACCAGAGATGATTTTCAGCGAGCTGCATCACAAGTATGTGGCATATCTCTCTCTGACAACGTAGTTGACATTGTTTTCCATTTGTTTGATGCAAATTGGGACAGAAACCTAAGCGCAGATGAGTTTGTGAGAGTGTTACACAAGCGAGAAAGGGACATTGTACAGCCTGTGGAGGCAGGAATCTTTGGTTTCTTGTCTTGTTGCTGGAACTGTACGGATAATCTATCACGCTTTCGGTTGTTTTAG 1527 0.4375 MSSFFTLRKSSPLIYRFPIQRSFKIRNSSTTSPSSSSSSPSAPSLLNRSSSSTNPHYTPPRGSGLGPNWAWALAAGSGLGVLLHYLAKPNSQFDSPFLSKLLPSVDSWSTPPGNEVESDRRSTPSLFRKLSLPESSSFFLIGDAYRRKVFFNYEKRIRLRSPPEKVFEYFASYRTPEGELLMKPADLMRAVVPVFPPSESHLVRDGYLKGERSPGHLRCAPSEFFMLFDVNGDGLISFKEYIFFVTLLSIPESSFSIAFKMFDVDNNGEINKEEFKKVMALMRSHHRQGVQHRDGLRIGLKVIDSVENGGMLEYFFGKDGNECLQHDKFVQFLRDLHEEIVRLEFSHYDYKSQKTISAKDFGLSMVASADIGHLDKLLDRVDQLDNDQRLKNVRITFEEFKNFAELRKKLLPFSLALFSCGKVNGLLTRDDFQRAASQVCGISLSDNVVDIVFHLFDANWDRNLSADEFVRVLHKRERDIVQPVEAGIFGFLSCCWNCTDNLSRFRLF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02859 508 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Adu06g02859 508 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Adu06g02859 508 SUPERFAMILY EF-hand 223 475 IPR011992 -
Adu06g02859 508 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 505 IPR039800 GO:0005509|GO:0006851
Adu06g02859 508 PANTHER CALCIUM UPTAKE PROTEIN, MITOCHONDRIAL 1 505 - -
Adu06g02859 508 MobiDBLite consensus disorder prediction 26 61 - -
Adu06g02859 508 Pfam EF-hand domain pair 425 473 IPR002048 GO:0005509
Adu06g02859 508 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Adu06g02859 508 SUPERFAMILY EF-hand 342 477 IPR011992 -
Adu06g02859 508 MobiDBLite consensus disorder prediction 26 59 - -
Adu06g02859 508 CDD EFh 223 280 IPR002048 GO:0005509
Adu06g02859 508 Pfam EF hand 258 281 IPR002048 GO:0005509
Adu06g02859 508 SMART efh_1 220 248 IPR002048 GO:0005509
Adu06g02859 508 SMART efh_1 254 282 IPR002048 GO:0005509
Adu06g02859 508 SMART efh_1 448 476 IPR002048 GO:0005509
Adu06g02859 508 Gene3D - 195 287 - -
Adu06g02859 508 Gene3D - 345 482 - -
Adu06g02859 508 CDD EFh_MICU 255 476 - -
Adu06g02859 508 Pfam EF hand 224 241 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02859 Adu-Chr6 105888828 105892711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02859 51 441 EF-hand Containing Proteins AT4G32060 64.706 1.46e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02859 K22827 - gmx:100806575 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02859 06 105888828 105892711 Adu08g02569 08 41739876 41744710 PCT