Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01845 ATGCGCCATTCATATTTCTCCTACGTTAGAAATGTAACCCGATTCCGTTCACGTTCACGTTCTGCTGCATACTCTTCCTTCTTTTCGGAATTCGATGGAGATTCTACACTCGCAAGCCTCAAGCTTAAACAATCCCCTGCTTCAGATGATTCTTCTAATGTGGCGTTTAAGAAAATTTCTTCTATTTACTACGGTGATAGTATCTCGGTCAAGAAACCCATATCTAAGAGAAATGATAATGCAAAAGAGTCCCAAAGTCAGCCAGGGATATCATGGCTTTCAAACATATATAACAATAATTTATTATTACAACGGAAAGGACATTCTCGCAAAAAGAAACAGAAACACTTGTTTGAATTTTCTCAAGAGAACCGTTTTAATAAGTTGGTTAGAATTTGTGCAAAGGTACTTGGACCGGAGGCTACCATTGCATTGTTTGGTAAAGTTGGACGAGATCCAGGGATCAAAGGGTACAATGCACTGATAGAAATGTGCATAGAAAAGGCTAGGGAAAGTAGTGACGAAGACATAGTGATAGAAGAGTTGGGGAAGGTTTTCCATCTTTTTAAATTGATGGGTGAACGAGGATTTCGGCTAGAAGAGCAATCATATCGTCCACTTCTTTTGTATACTATTGACATGTGTATGGTTGAAGAGTTTCATTTTTTCTGTGATGCTATCAAAGACCAGAATGCCAGTTTAATTACCAGACTCGGTTACTACGAAATGATGTTGTGGTTAAGAGTTAATAATGAAGAAAAGATTCAAGAAATCTGTAATCTCATTGCAGAGAATGATGGTGAAGAAACTTCTGATTTACGAGAAAATTATTTCTTGGCTCTTTGTGAGAGTGAGCGGAAGAAGGAGATATTGGAGCTATTGGAAATCATAGACATAAAAAAGCTTTCATCTGTAGAATCTGTAGAAAAGATATTTCAGGCATTAGGAAGGCATCAACTGGAACCTGTTGCGGAGAACTTCCTTTTGGACTTCAAAACAAGTGATTATGAAACAAATAATATTACAAACTTCATTGCAAGTTATGCTGTTAGCATCCCAGATTTATTGGTTGAGAATGTCATTACAAAATTCAAGGATTTGCACCAAACACTTGAAGTGTCACCTTCATCCTCATCATATGAGAAGCTAATTTTACATTGCTGCACGTTGCGCGAGGTGCGTGTAGCTCTTGATATTGTTGGTGAAATGTGTGAAGGGGGCTTGACTTTATCAAATGAGATGTTACAGTCCATATTACAAACTTGTGAGGAAACATCCGAATATAATTTGGTTCATCGGATCTTCTCTACAATACGCCAGTACAATCTGGAGACAAATGATAAGACATTCAGATGTATGATAGACTTGTTCTTGAAGATGAAAGACCTTGAAGGTGCATATAGAATGCTCGATGAAATGGGGGAACTGAATTTGAAACCATCAGCTAGCATGTACAATACCATAATGGCAGAATGTTTTAGAGAGAAAAACACGAGTGATGGGGTCAGGGTCCTTGAGCACATGCAAAATGCTGATGTAATGCCTGATTCAGAGACTTTTAGCTACCTGATTAGCAACTCTGAAACTGAAGAGGATGTAGTCATGTATTATAAAGAACTGAAGGAATCTGGAATCAAACCTACAAAGCAAATTTTCATGGCCCTTATAAATGCTTATGCTGCTTGTGGACAGTTGGAGAAAGCAAAACAGGTAGTGTTAGATCCATTGATACCACAGAAGAACTTGAACCAAATCAAGTGTGTGCTTGTTTCAGTTCTTGCAGCACATGGGCAACTGTCTGAAGCTATTCATTATTACGAGGAAATCAAGAAAGCTGGACATAATTTGGAGCCAAAAGATATTATGAGTCTCATCGAGAAGGCTCGGTCCAATGTAGAGTTGGACAGGTTGCTTCTTCTACTTGAGGAATTAAATGATACAGATTATTGGAATGGAGCTTGCTGCAGAATCATCTTGTATTGTATTTGGAACAAGGATATAAGTTCTGCTGTCAACTTGTGTAAGCTCCTCAAGAATAAGTACCAAAGCAACGAACTGGTTACAGAAGCTCTCTGCGATAAGCACCACAGCGATGAATTGGTTATGAAAGTTCTCTTTGATAAGGTGTTCTCTCTCATCGACGGGTCAGAGTCGAGCCATTTGCAAGCGTGCCTCGAACTGCTTTCTGAAATCAAGGATAAGCTAGGCCTTGTGCCTCCAAAGGAATATCATGATTCTCTGCTAAGTGCTCATGCCAAAACCTCTGAATTACATAATGCTAACTGA 2286 0.3876 MRHSYFSYVRNVTRFRSRSRSAAYSSFFSEFDGDSTLASLKLKQSPASDDSSNVAFKKISSIYYGDSISVKKPISKRNDNAKESQSQPGISWLSNIYNNNLLLQRKGHSRKKKQKHLFEFSQENRFNKLVRICAKVLGPEATIALFGKVGRDPGIKGYNALIEMCIEKARESSDEDIVIEELGKVFHLFKLMGERGFRLEEQSYRPLLLYTIDMCMVEEFHFFCDAIKDQNASLITRLGYYEMMLWLRVNNEEKIQEICNLIAENDGEETSDLRENYFLALCESERKKEILELLEIIDIKKLSSVESVEKIFQALGRHQLEPVAENFLLDFKTSDYETNNITNFIASYAVSIPDLLVENVITKFKDLHQTLEVSPSSSSYEKLILHCCTLREVRVALDIVGEMCEGGLTLSNEMLQSILQTCEETSEYNLVHRIFSTIRQYNLETNDKTFRCMIDLFLKMKDLEGAYRMLDEMGELNLKPSASMYNTIMAECFREKNTSDGVRVLEHMQNADVMPDSETFSYLISNSETEEDVVMYYKELKESGIKPTKQIFMALINAYAACGQLEKAKQVVLDPLIPQKNLNQIKCVLVSVLAAHGQLSEAIHYYEEIKKAGHNLEPKDIMSLIEKARSNVELDRLLLLLEELNDTDYWNGACCRIILYCIWNKDISSAVNLCKLLKNKYQSNELVTEALCDKHHSDELVMKVLFDKVFSLIDGSESSHLQACLELLSEIKDKLGLVPPKEYHDSLLSAHAKTSELHNAN 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01845 761 PANTHER OS02G0132600 PROTEIN 70 761 - -
Adu08g01845 761 Pfam Pentacotripeptide-repeat region of PRORP 378 527 IPR033443 -
Adu08g01845 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 446 480 IPR002885 -
Adu08g01845 761 TIGRFAM PPR: pentatricopeptide repeat domain 484 516 IPR002885 -
Adu08g01845 761 TIGRFAM PPR: pentatricopeptide repeat domain 449 481 IPR002885 -
Adu08g01845 761 Coils Coil 627 647 - -
Adu08g01845 761 Gene3D Tetratricopeptide repeat domain 533 705 IPR011990 GO:0005515
Adu08g01845 761 Gene3D Tetratricopeptide repeat domain 408 532 IPR011990 GO:0005515
Adu08g01845 761 Pfam PPR repeat 552 571 IPR002885 -
Adu08g01845 761 Pfam PPR repeat 588 613 IPR002885 -
Adu08g01845 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Adu08g01845 761 PANTHER OS02G0132600 PROTEIN 70 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01845 Adu-Chr8 30386784 30394910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01845 374 644 Glycosyltransferase AT1G05670 20.285 2.05e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01845 - - ahf:112773224 1419.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01845 08 30386784 30394910 Adu08g01845 08 30386784 30394910 ECH
Adu08g01845 08 30386784 30394910 Adu03g01596 03 25564684 25578003 PCT