Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01596 ATGCGCGCCTCCACCATAAGAAAACTATGCACCCTCAGCACCCTATTTCGCTCTCACTCAGCATGGAAAGCCATGGCACTTGCCTCTACCTCTTCCGTTTCCATTTCTGAGCACAATGCTTCTGAGTTCAACCATTCTTCTATGAGCCACAACCGTGTCCCTTCTGGTTTTGTATCTTGGAGTGCAGAGGATTCTCCTGATGATGATAATACGTCTTCCGAGGTTTCTTCTATAGTGTACAGTCCATCTCTGGCAGAGGAACCTGTTGTCGTGAAAGAGGAACCTGTTGTCGAAGAAGTTGACTATCGCAAAGCAAAAATGGAAAAAGTAGCAGATTTCACGTGGTGTCCTGATCTGTCTCCTGGCTACCTTTTGACTAAACGGAGGGGGTTAGCCCGTGAGAGGAAAAACAAATGGATTTTTAAACTCAGCCATGATGAACGTTTTGATAGGTTAGTTAAAATGTGTGCAAAAAGACTAGGAACAGGGACGACCCTTGATGTGTTTCGTCAGCTGGGTCGAGAGACCGGTGTGAAAGAGTTCAATGCATTAATAAAGATGAGTATACAGAAGGCAAGGACTACTAATAATGAATACATTGCCATAGAAGAATTGAGTAAGGCTTTTCACCTTTTAGAAAATATGAAGGAGTGCGGTTTTAAGCTAGAAGAGGAAACATATCAACCACTGCTTAGGTATGTCATAGACATGGGCATGGTTAAAGAGTTTCAACTTTTCTCTGATGTGGTCAGAGCTGAGTGTTCAGTTTCACGGTTAGGTTACTATGAAATGTTGCTGTGGATAAGAGTTGAAGATGAAGAAATGATTCGGGATATTTGTGAATATATTACCGTAGAAGATGGCCAAGACACTGCTGCTATGCGAGAAAATTACTTATTGGCTCTTTGTGAAAGTGATCTGAAGATCCAGATTACAGATGTGTTGAAAAATATAGACATAACAATGCTTTCATCTGCAAAATCTATAGCAAGTGTATTTCAATCATTAGGAAGGCTACAGTTGGAATCTCTTGCCGAGAATTTATTTTTGGATTTGAGAGCACAAGATTTTGATGAAGATGATATTTCAGGCTTCATTGCTGATTATGCTGTTAGCATTCCAAATTTAGCGGTTGAAGATATCATCTCAAAATTCAAGAGTTTGCATGATCTATTGGAAGTTTTACATTCATCGTCATCATATGAAAAGCTGATTATGTATTGCTGTGATTTAGGCAAGGTTGATGTTGCACTTGATCTTGTTGATAATATGTGTGAAGCAGGCTTTACATTGTCAACTAGGATGTTACAGTCCATATTACACATTTGTGAGGAAACCTATGAACATATTTTGGTTTACCGGATCTATTCCATCATACAGCGGTTCCATTTGAAGTTGAATGGTGAAATATGTAGGTGTTTGGTAAATTTTTGCGTGAGGGTGAAAGATTTTAAAGGTGCATACAAGATGGTTGATGACTTGGAGAAAATGAATTTCAAACCTACTACCGCCATGTACAATGCTATAATGGCAGGATATTTTCGAGAGAAAAATATCAGTGGTGCTCTGAGGGTCCTCAAGCACATGCAGGATGCCAATCTTAATCCTGATGTACAGACTTTCAGCTATTTGATTAGTAATTGTGAAACAGAAGAGGATATAATCAAGTATCGTGAAGAAATGGAGCAATATAAAATCCCACTTGCAAAACCGATTTTTATGGCCCTTATTAATTCATATGCAGCTTGTGGCAAATTGGATATGGCAAAACAGGTCATTTTGGATCCGAACATACCAGCAAAAAGCTTAAATGAAATCAAGAGCGTCCTTGTCTCAGCTCTTGCATCACATGGGCAGTTGTCCGAGGCACTCTTAGTATATGAGGAGATTAATAAAGCTGGATACAATTTGGAACCAAAAGCTGTTATAAGTCTTATCGAAGAGTTCACCAAATTCAAAGGAGAGTTGGATGGGATGCTTATGCTACTTACAGAATTGAGTGATCTAGACTATTGGGTCGACGGCTGCTTCAGAGTTATCATATATTGTATTCACAACAAGCATCTAAGTTCTGCTATTGACTTGTTCAAGAAACTCAAGGATAAGTTTGAAAGTGATGAACTAGTATTGGAAGTTCTCTTTGATGAAGTGTTTGCTGCAATTGCAACATCCGAGTCCTCAAATTTGCAGATTGGTTTAGACTTGCTTTGGGCAGTCAAGAACGAGCTTGGTCTCGTGCCTTCACGGCAATGTCTTGATTTTCTTCTAAGTGCCTGCACCAATGCTGGAGATTTGAGTAATGCTCGTTTGATTTGGAGAGAATATGAGGTTGCTGGATTTCCATACAACGTGCTAAGTTATTTGAGGATGTATCAAGCACTTTTGGCATCGGGAGATTATAGATCTGCTAACTTTATGCTAAGTAAAATTCCGAAAGATGACAGCGAGGTATCTGCTATCATCAAAGCCTGTCAAGAAACATACTCTGGTCTTTCCTCTGTGGCAAAGATGAAAACGAAAGTAACAAAAAAGAAAGAAAAACGAGAGGCTTGA 2553 0.3937 MRASTIRKLCTLSTLFRSHSAWKAMALASTSSVSISEHNASEFNHSSMSHNRVPSGFVSWSAEDSPDDDNTSSEVSSIVYSPSLAEEPVVVKEEPVVEEVDYRKAKMEKVADFTWCPDLSPGYLLTKRRGLARERKNKWIFKLSHDERFDRLVKMCAKRLGTGTTLDVFRQLGRETGVKEFNALIKMSIQKARTTNNEYIAIEELSKAFHLLENMKECGFKLEEETYQPLLRYVIDMGMVKEFQLFSDVVRAECSVSRLGYYEMLLWIRVEDEEMIRDICEYITVEDGQDTAAMRENYLLALCESDLKIQITDVLKNIDITMLSSAKSIASVFQSLGRLQLESLAENLFLDLRAQDFDEDDISGFIADYAVSIPNLAVEDIISKFKSLHDLLEVLHSSSSYEKLIMYCCDLGKVDVALDLVDNMCEAGFTLSTRMLQSILHICEETYEHILVYRIYSIIQRFHLKLNGEICRCLVNFCVRVKDFKGAYKMVDDLEKMNFKPTTAMYNAIMAGYFREKNISGALRVLKHMQDANLNPDVQTFSYLISNCETEEDIIKYREEMEQYKIPLAKPIFMALINSYAACGKLDMAKQVILDPNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLRMYQALLASGDYRSANFMLSKIPKDDSEVSAIIKACQETYSGLSSVAKMKTKVTKKKEKREA 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01596 850 PANTHER OS02G0132600 PROTEIN 7 846 - -
Adu03g01596 850 TIGRFAM PPR: pentatricopeptide repeat domain 505 538 IPR002885 -
Adu03g01596 850 TIGRFAM PPR: pentatricopeptide repeat domain 400 432 IPR002885 -
Adu03g01596 850 Pfam Pentacotripeptide-repeat region of PRORP 399 546 IPR033443 -
Adu03g01596 850 Gene3D Tetratricopeptide repeat domain 677 850 IPR011990 GO:0005515
Adu03g01596 850 Gene3D Tetratricopeptide repeat domain 397 567 IPR011990 GO:0005515
Adu03g01596 850 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 502 536 IPR002885 -
Adu03g01596 850 Pfam PPR repeat 609 634 IPR002885 -
Adu03g01596 850 Pfam PPR repeat 573 593 IPR002885 -
Adu03g01596 850 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 397 431 IPR002885 -
Adu03g01596 850 PANTHER OS02G0132600 PROTEIN 7 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01596 Adu-Chr3 25564684 25578003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01596 394 803 Glycosyltransferase AT1G05670 20.675 4.12e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01596 - - ahf:112737814 1578.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01845 08 30386784 30394910 Adu03g01596 03 25564684 25578003 PCT