Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01627 ATGGCAGCTCTCACTTCTTTGTCCTTCTCATCATCATTCACTCAGTGCTGTGAGAGAAAAGCAACTGTGTCTTCTTCAACTCATCGTTTCTTTGTCTCTTCAAGTTCTGAAGTCTTCGGTTTTAGGACCATTTTCTCGTACCATTATGGGGGTGTTCGAGCTTCTAGTTCCTCATCCAAAATGGTTGTCCAATGCATGTCTTCTGCCACAGATGCTCCTACTGTTTCTGAGACAAAGTTAAATTTCCTTAAGGCATATAAGCGACCAATCCCAAGTATCTACAACACTGTTCTGCAGGAGCTTATTGTGCAGCAACATTTGATGAGATATAAGAGATCGTATCGCTATGACCCTGTGTTTGCTCTTGGTTTTGTCACTGTTTATGATCAACTCATGGAAGGGTATCCTAGTGATGAGGACCGAGATGCTATCTTCAAAGCATATATTAATGCTTTGAATGAAGATCCTGAACAATACAGAAAAGATGCTCAAAAGTTGGAAGAGTGGGCGAGGGCTCAAAACCTAACTTCCCTTGTTGAGTTTTCATCCAAAGATGGAGAAATTGAGGGGATCTTGAAGGACATAGCAGAAAGAGCAGGAAAGGGGGATTTCAGCTACAGTCGTTTCTTCGCAGTAGGACTATTTCGTCTTCTTGAGTTAACAAATGCAACAGAGCCAACAATTTTGGAAAAGCTCTGCGCAGCTTTAAACATCAACAAAAAAAGTGTTGATCGGGACTTGGATGTGTATCGGAATCTGCTTTCCAAGTTGGTTCAAGCAAAGGAGCTGCTAAAGGAATACGTTGACAGGGAGAAGAAGAAAAGAGAAGAGAGAGCTGAACCCCAAAAGGCTAATGAGACCATTACAAAGTGTCAGGGACAACAACTGTCTGAGTTTGGATAA 903 0.4186 MAALTSLSFSSSFTQCCERKATVSSSTHRFFVSSSSEVFGFRTIFSYHYGGVRASSSSSKMVVQCMSSATDAPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFKAYINALNEDPEQYRKDAQKLEEWARAQNLTSLVEFSSKDGEIEGILKDIAERAGKGDFSYSRFFAVGLFRLLELTNATEPTILEKLCAALNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKANETITKCQGQQLSEFG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01627 300 Coils Coil 250 280 - -
Adu08g01627 300 Hamap Protein Thf1 [thf1]. 69 276 IPR017499 GO:0010207|GO:0015979
Adu08g01627 300 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 71 275 IPR017499 GO:0010207|GO:0015979
Adu08g01627 300 MobiDBLite consensus disorder prediction 285 300 - -
Adu08g01627 300 Pfam Thylakoid formation protein 74 278 IPR017499 GO:0010207|GO:0015979
Adu08g01627 300 MobiDBLite consensus disorder prediction 271 300 - -
Adu08g01627 300 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 289 - -
Adu08g01627 300 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 289 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01627 Adu-Chr8 26983599 26985778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01627 - - gmx:100814341 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01627 08 26983599 26985778 Adu08g01627 08 26983599 26985778 ECH
Adu08g01627 08 26983599 26985778 Adu03g01341 03 19692478 19696608 PCT