Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01341 ATGGCCGCTGTTACTTCTTCTTTCTCTCTCTCTACTCTTTCACAGTGCTCGCAGAGGAAGAACCTTTCCTTCTCTTCTTCTACTCGTTTTTTGGGAACCAATTCCGATTCTTTCCGATTGGGACCGAATTTCTCGCTACTATATGTTGCCGTTCGAGCTTCCGATTCCGCTTCCAGAGTGGTTGTTCGGTGTTCCTCTTCCCTCTCAGATATTCCAACTGTTTCGGAGACAAAGTTAGGTTTCCTTAAAGCCTATAAACGACCAATCCCTAGTATCTACAACAGTGTGTTGCAGGAGCTGATTGTCCAGCATCATTTGATGAGATACAAGAGATCATACCAGTATGACCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGATCAACTCATGGAAGGGTATCCTAGTGATGAGGATCGGGATGCTATCTTCCAGGCATACATTAATGCATTGAAGGAAGATCCAGAACAATACAGAGCAGATGCACAGAAGTTGGAAGAATGGGCACGGGCTCAAAACTCAACCTCCCTGATTGAGTTTTCATCCAGAGAAGGAGAAGTTGAGGGAATATTAAAGGATATTGCAGAAAGAGCTGGTGCAAAGGGGAATTTTAGCTATAGTCGCTTCTTTGCAATTGGCCTCTTTCGCCTTCTTGAATTGGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTTTGTGCAGCTTTAAATGTTGACAAAAGAAGTGTTGATCGGGACTTGGATGTGTATCGCAATCTACTTTCTAAGTTGGTTCAAGCTAAAGAGCTGCTAAGGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGTCTGAACCACAAAAGGCAAATGAGGCCATCACAAAATGTTTGGGACAACAGCAAATTTCTGCCCTGTTGGTATTACATACTGTATTTGGTGTAATCTTAATGGTGGTCCATCTAAATCCTTGTTTTGTCACACCTGTCGAGACTTAA 981 0.4241 MAAVTSSFSLSTLSQCSQRKNLSFSSSTRFLGTNSDSFRLGPNFSLLYVAVRASDSASRVVVRCSSSLSDIPTVSETKLGFLKAYKRPIPSIYNSVLQELIVQHHLMRYKRSYQYDPVFALGFVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPEQYRADAQKLEEWARAQNSTSLIEFSSREGEVEGILKDIAERAGAKGNFSYSRFFAIGLFRLLELANAMEPTILEKLCAALNVDKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERSEPQKANEAITKCLGQQQISALLVLHTVFGVILMVVHLNPCFVTPVET 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01341 326 Coils Coil 250 280 - -
Adu03g01341 326 Pfam Thylakoid formation protein 73 278 IPR017499 GO:0010207|GO:0015979
Adu03g01341 326 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 289 - -
Adu03g01341 326 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 289 IPR017499 GO:0010207|GO:0015979
Adu03g01341 326 Hamap Protein Thf1 [thf1]. 68 276 IPR017499 GO:0010207|GO:0015979
Adu03g01341 326 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 70 275 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01341 Adu-Chr3 19692478 19696608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01341 - - aip:107632658 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01341 03 19692478 19696608 Adu03g01341 03 19692478 19696608 ECH
Adu08g01627 08 26983599 26985778 Adu03g01341 03 19692478 19696608 PCT