Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01599 ATGGCAAGTGAGTTGATATCTGTGCCCTACGCCCTATCAACCACACAAAGAGTAGTAGTAGCAAAACATAGGAACCACTTTGGACGCAAAACAGTTACTCATGCCACTGCAAAAATTCATGTCATCTGTGGTTATTCCACCAAAGAGGAGGATGCCCAGTTAATTGGGAGGCGTTCAGCTAATTACCAGCCCAATCTATGGACTTATGAATTTCTTCATCAGTCTCACCACAATCATCACGTGGTTGATAAAGTTGAAGAGAGAGCAAGAAAGTTAGAAGAGAAGGTGCGATACAGGATGATGAATAGTTCAGACATGGAGCCACTGAACTTGCTTGAACTCATTGACGATCTTCACCGGTTGGGCCTCTCTTACAAGTTCCAAAACCACATCAACTCTGCTCTTTCCCGCATTCATTCTTCACAATATATGCACCTTCACACGCACAAAACTCTACATGCTACTGCTATCCTCTTCAGAATTCTTAGACAACATGCTTTTCACGTCTCTCAAGATGTATTTGAGAGTTTTACGGATGATGAGAAAAACTTTAAGCCTGAAATTGGCAATGATGTGCAAGGAGTGCTAAGTTTGTACGAGGCATCACACCTTAGCTTTGAGAAAGAAAATTTATGTGAGAAGGCAAAGACAATTTCAGCAACAAATTTGATGAACATAATATCAAAAGATGAGACAGAGAATAAAGTAAAAGAAAGCACTAGGAGTGTGTTGGAGGGTCTTCCGTACCACCATAGTCCTTACAGAGTAGAGGCACGACGCTATATTGACACATACCATAAAAAGGAACCACATAATCAGTTGCTATTAGAGCTTGCCAAGCTTGATTTCAACATGGTTCAGTCATTATATCAACAAGAGCTTCAACAAATGAAAAGGTGGTGGAGGGACATGGGGCTGGCTATCAAGCTGAGCTTTGCCCGGGATAGGTTAATGGAATCTTTCTTTTGGTCACTGGGAATAGTCTCACATCCAAATTTGTCTTATTGTCGTAAAGAACTTACTAAGGTGGCAACTTTAGTTACCGTTCTTGATGATGTCTACGATGTCTATGGTACTTTGGATGAACTGGAGCTCTTCACGGATGCTGTTGAGAGATGGGATGTAAATGCTATTAATAATCTTCCAGACTACATGATATTGTGCTTCCTAGCGCTTTACAACACTATCAATGAAATGGCTTTTGATATCTTCAAAGATTATGCAGTCAAGTGTCTTCCCTATCTCAAAAAAGCTTGGTGTGATTTGTGCAAATCGCTTCTGCAAGAAGCAAAATGGTCCAACAACAAAGTTGTACCAAGATTGAAGGAGTACTTAGAAAATGGTTCAGTCTCATGCTCAGGCGGGGTTTTTCTTACTCACTCCTTCTTCTTACTCAATCAAGAAATAACAGAGCCAGCACTTCATTCGTTAATTAACTACCACAATCTCTTGCGCTCTTCATCCACCGTTTTCAGGATTAGCAACGATTTGGCCACCTCAACGGATGAGATGGAGTGCGGCGAAACCGCGAATTCAATAACGTGCTATATGAATGAAACGGGTGGCTCCGAAGAGGATGCACGAAGGAACTTGAGAAGTCTTATTGACGAAGCATGGAAGAATATGAACAGATGCCTAGTGATGGATTCTACATTCGACAAATCCTTCATAGAAGTAGCCATGAACCTTGCCCGTATTGCCCAATTCACATACCAACATGGAGATGGACATGGACGACCAGACAACAGATCAAAGACCAGAATAAAGTCCTTGCTTGTTGATCCAATTCCTGTGAATGTGCCAACATGA 1809 0.4146 MASELISVPYALSTTQRVVVAKHRNHFGRKTVTHATAKIHVICGYSTKEEDAQLIGRRSANYQPNLWTYEFLHQSHHNHHVVDKVEERARKLEEKVRYRMMNSSDMEPLNLLELIDDLHRLGLSYKFQNHINSALSRIHSSQYMHLHTHKTLHATAILFRILRQHAFHVSQDVFESFTDDEKNFKPEIGNDVQGVLSLYEASHLSFEKENLCEKAKTISATNLMNIISKDETENKVKESTRSVLEGLPYHHSPYRVEARRYIDTYHKKEPHNQLLLELAKLDFNMVQSLYQQELQQMKRWWRDMGLAIKLSFARDRLMESFFWSLGIVSHPNLSYCRKELTKVATLVTVLDDVYDVYGTLDELELFTDAVERWDVNAINNLPDYMILCFLALYNTINEMAFDIFKDYAVKCLPYLKKAWCDLCKSLLQEAKWSNNKVVPRLKEYLENGSVSCSGGVFLTHSFFLLNQEITEPALHSLINYHNLLRSSSTVFRISNDLATSTDEMECGETANSITCYMNETGGSEEDARRNLRSLIDEAWKNMNRCLVMDSTFDKSFIEVAMNLARIAQFTYQHGDGHGRPDNRSKTRIKSLLVDPIPVNVPT 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01599 602 Gene3D Farnesyl Diphosphate Synthase 64 586 IPR008949 -
Adu08g01599 602 Pfam Terpene synthase family, metal binding domain 276 540 IPR005630 GO:0000287|GO:0010333|GO:0016829
Adu08g01599 602 Gene3D - 106 271 IPR036965 GO:0010333|GO:0016829
Adu08g01599 602 PANTHER TERPENE SYNTHASE 12-RELATED 50 597 - -
Adu08g01599 602 SFLD Isoprenoid Synthase Type I 271 597 - -
Adu08g01599 602 PANTHER OS04G0344100 PROTEIN-RELATED 50 597 - -
Adu08g01599 602 CDD Terpene_cyclase_plant_C1 57 595 IPR044814 GO:0010333|GO:0016102
Adu08g01599 602 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 63 270 IPR008930 -
Adu08g01599 602 Pfam Terpene synthase, N-terminal domain 67 233 IPR001906 GO:0010333|GO:0016829
Adu08g01599 602 SFLD Terpene Cyclase Like 1 C Terminal Domain 271 597 IPR034741 -
Adu08g01599 602 SUPERFAMILY Terpenoid synthases 271 596 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01599 Adu-Chr8 26413128 26417417 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01599 K12742 - gmx:100786684 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01599 08 26413128 26417417 Adu08g01599 08 26413128 26417417 ECH
Adu08g01599 08 26413128 26417417 Adu03g01281 03 17918249 17923557 PCT