LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g01281	ATGTTACTCAATTCTTCTTCCTCCATTATTTCAAATGTTCATCTTGCCAAACATAACGAACCAGTGGAACCTCTTATTAGTAATCATAGAATTATTAACAGTTCTCGGATCCGTTGCGTGGCAACAACCACAGCCGTTGTTCCTCCAAGAAAATCAGCAAATTACCAGCCTAACCTCTGGACTTTCGACTTTTTACAGTCCTTAAAGCATGATTATTCGGATTCGATATACGAGGATTTAAATGGGAATCTAAAAGAGAAAGTTAGGAGAATGATAAAGCAGAAGGAAGATAATGGAGAGATATGGCGGCATAAACTGGATCTAGTTAATGATGTGAAGAGGTTGGGTCTGAGTTACCACTTTGAGAAGGAAATAGAAGAAACACTTGATAGGTTTGTGTCTAGTAGTGGCAAATTTGTGAATACGAATAACCTGCACGAAACCGCTTTAAGCTTCAGGCTCCTAAGAGAATATGGCTATGATGTCTCACCAGATGTGTTTGAGAAGTTCAAGGACAAGAAAAATAACTTCAAGAAAAGCCTTACCAAAGACGTGAAAGGGATGCTGAGTCTATACGAGGCATCATTTCTTGGTTATGAAGGAGAAACAATCTTGGATGAGGCAAAATCATTCACAACCTTCCATCTCAAGAACTTAATCATCAATGATGAGAATAATGTCCTCTTAGAACAAGTGAAGCATGCATTGGAACTTCCATTGCATCATAGAATCCAAAGACTTGAAGCCAGATGGTACATTGAGGCTTATGAAAAAAGAAGAGACGCAAATAGGATATTACTTGAAGCAGCTAAATTAGATTTTAACGTTGTTCAATCAACACTTCAAAAAGACCTTCAAGAAATCTCAAGATGGTGGAAGCAAGTGGGAGTAGCCTCAAAGTTAAGCTTCAGCAGAGACAGGTTAATGGAGTGTTTCTTTTGGACTGTTGGAATGGCCTTTGAGCCTCATTTCAGTGATCTCCGTAAAGGATTAACCAAAGTCACTTCCTTCATTATAATAATCGATGATGTCTATGATGTTTATGGGACCTTGGATGAGCTTGAGCTTTTCACCGCAGCTGTAGAAAGTTGGGACATTAAAGCAGTTCAAGTTCTACCAGATTACATGAGGATTTGCTTTCTAGCACTCTACAACACTGTTAACGAATTGGCCTATGATGTTCTTTACAAGCAAGGACTTGACATCCTTCCCTACCTCACCAGAACATGGTCAGATATGTTGAAAGCATTCCTAATAGAAGCCAAGTGGTGCAAGGAGAAAAATATACCAAAATTTGAGGAGTACCTCAATAATGCTTGGGTGTCAGTGTCTGGTGTTGTTATATTAACGCATGCCTATTTCTTATTGAATCACAACATCACTAAAGAAGCACTTGATTCCTTGCATAATTATCATGACCTATTGCGTGGACCATCTACTATTTTTCGACTTTGCAATGATTTGGGAACCTCTCAGGCTGAGCTACAAAGAGGTGAAGCAGCAAGCTCTATTATATGCTACATGAGGGAAAATGGTGCAAGTGAGGAATGTGCACACAAATACATAAACAATGTGCTAGATGAGACATGGAAGAAAATGAACAAAGATAGAGTCACCAATTCTCCATTCTCTAAATCTTTCATTGAAACAGCAATGAACCTTGGTAGGATTTCTCAGTGCACGTATCAATATGGAGATGCCCATGGAGCACCTGATGCATCAGCAAAGAATCGAATTCGTTCTTTGATAATTGAACCTGTTTCTCTATGA	1770	0.3887	MLLNSSSSIISNVHLAKHNEPVEPLISNHRIINSSRIRCVATTTAVVPPRKSANYQPNLWTFDFLQSLKHDYSDSIYEDLNGNLKEKVRRMIKQKEDNGEIWRHKLDLVNDVKRLGLSYHFEKEIEETLDRFVSSSGKFVNTNNLHETALSFRLLREYGYDVSPDVFEKFKDKKNNFKKSLTKDVKGMLSLYEASFLGYEGETILDEAKSFTTFHLKNLIINDENNVLLEQVKHALELPLHHRIQRLEARWYIEAYEKRRDANRILLEAAKLDFNVVQSTLQKDLQEISRWWKQVGVASKLSFSRDRLMECFFWTVGMAFEPHFSDLRKGLTKVTSFIIIIDDVYDVYGTLDELELFTAAVESWDIKAVQVLPDYMRICFLALYNTVNELAYDVLYKQGLDILPYLTRTWSDMLKAFLIEAKWCKEKNIPKFEEYLNNAWVSVSGVVILTHAYFLLNHNITKEALDSLHNYHDLLRGPSTIFRLCNDLGTSQAELQRGEAASSIICYMRENGASEECAHKYINNVLDETWKKMNKDRVTNSPFSKSFIETAMNLGRISQCTYQYGDAHGAPDASAKNRIRSLIIEPVSL	589

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g01281	589	Gene3D	Farnesyl Diphosphate Synthase	57	577	IPR008949	-
	Adu03g01281	589	Coils	Coil	77	97	-	-
	Adu03g01281	589	SFLD	Terpene Cyclase Like 1 C Terminal Domain - Enzymatic	263	588	-	-
	Adu03g01281	589	Pfam	Terpene synthase family, metal binding domain	267	532	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Adu03g01281	589	CDD	Terpene_cyclase_plant_C1	50	586	IPR044814	GO:0010333\|GO:0016102
	Adu03g01281	589	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	56	261	IPR008930	-
	Adu03g01281	589	PANTHER	TERPENE SYNTHASE 12-RELATED	38	588	-	-
	Adu03g01281	589	SFLD	Terpene Cyclase Like 1 C Terminal Domain	263	588	IPR034741	-
	Adu03g01281	589	SFLD	Terpene Cyclase Like 1 N-term	104	262	-	-
	Adu03g01281	589	Pfam	Terpene synthase, N-terminal domain	60	236	IPR001906	GO:0010333\|GO:0016829
	Adu03g01281	589	PANTHER	OS04G0344100 PROTEIN-RELATED	38	588	-	-
	Adu03g01281	589	SUPERFAMILY	Terpenoid synthases	263	587	IPR008949	-
	Adu03g01281	589	Gene3D	-	97	262	IPR036965	GO:0010333\|GO:0016829

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g01281	Adu-Chr3	17918249	17923557	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g01281	K12742		K19968	gmx:100782452	787.719

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu03g01281	03	17918249	17923557	Adu03g01281	03	17918249	17923557	ECH
	Adu08g01599	08	26413128	26417417	Adu03g01281	03	17918249	17923557	PCT